Analysis of interatomic Contacts of Structural Units in PDB entry:
7O43


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O43 entry

There are 2 chains in PDB entry 7O43 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 15SER 829
B
 PRO 15SER 829
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 7O43. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 19Right-handed 310
Helix 2
2
A
54 70Right-handed alpha
Helix 3
3
A
98 110Right-handed alpha
Helix 4
4
A
147 169Right-handed alpha
Helix 5
5
A
195 201Right-handed alpha
Helix 6
6
A
261 263Right-handed 310
Helix 7
7
A
281 296Right-handed alpha
Helix 8
8
A
309 318Right-handed alpha
Helix 9
9
A
338 354Right-handed alpha
Helix 10
10
A
363 371Right-handed 310
Helix 11
11
A
388 392Right-handed alpha
Helix 12
12
A
458 471Right-handed alpha
Helix 13
13
A
485 490Right-handed alpha
Helix 14
14
A
516 528Right-handed alpha
Helix 15
15
A
540 551Right-handed alpha
Helix 16
16
A
559 567Right-handed alpha
Helix 17
17
A
585 591Right-handed alpha
Helix 18
18
A
629 642Right-handed alpha
Helix 19
19
A
656 659Right-handed alpha
Helix 20
20
A
663 678Right-handed alpha
Helix 21
21
A
690 693Right-handed alpha
Helix 22
22
A
697 703Right-handed alpha
Helix 23
23
A
720 722Right-handed 310
Helix 24
24
A
730 738Right-handed alpha
Helix 25
25
A
781 784Right-handed alpha
Helix 26
26
A
787 798Right-handed alpha
Helix 27
27
A
809 826Right-handed alpha
Helix 28
28
B
56 70Right-handed alpha
Helix 29
29
B
99 109Right-handed alpha
Helix 30
30
B
147 170Right-handed alpha
Helix 31
31
B
193 200Right-handed alpha
Helix 32
32
B
214 216Right-handed 310
Helix 33
33
B
262 265Right-handed 310
Helix 34
34
B
281 295Right-handed alpha
Helix 35
35
B
307 317Right-handed alpha
Helix 36
36
B
338 352Right-handed alpha
Helix 37
37
B
363 370Right-handed 310
Helix 38
38
B
388 394Right-handed alpha
Helix 39
39
B
420 422Right-handed 310
Helix 40
40
B
457 469Right-handed alpha
Helix 41
41
B
485 490Right-handed alpha
Helix 42
42
B
516 528Right-handed alpha
Helix 43
43
B
541 551Right-handed alpha
Helix 44
44
B
559 566Right-handed alpha
Helix 45
45
B
584 591Right-handed alpha
Helix 46
46
B
629 641Right-handed alpha
Helix 47
47
B
656 659Right-handed alpha
Helix 48
48
B
663 676Right-handed alpha
Helix 49
49
B
690 694Right-handed alpha
Helix 50
50
B
698 704Right-handed alpha
Helix 51
51
B
719 722Right-handed alpha
Helix 52
52
B
730 739Right-handed alpha
Helix 53
53
B
787 798Right-handed alpha
Helix 54
54
B
809 823Right-handed alpha
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There are 9 sheets in PDB entry 7O43. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
38 44anti-parallel
Strand 3
A
117 127anti-parallel
Strand 4
A
77 86anti-parallel
Strand 5
A
270 278anti-parallel
Strand 6
A
324 334anti-parallel
Strand 7
A
240 247anti-parallel
Strand 8
A
232 235anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 249first strand
Strand 2
A
357 360anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 326first strand
Strand 2
A
384 387anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 450first strand
Strand 2
A
708 711parallel
Strand 3
A
746 750anti-parallel
Strand 4
A
753 757anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
615 617first strand
Strand 2
A
474 478parallel
Strand 3
A
649 654parallel
Strand 4
A
681 686parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 178first strand
Strand 2
B
37 44anti-parallel
Strand 3
B
118 128anti-parallel
Strand 4
B
76 85anti-parallel
Strand 5
B
271 278anti-parallel
Strand 6
B
324 334anti-parallel
Strand 7
B
240 247anti-parallel
Strand 8
B
232 235anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 248first strand
Strand 2
B
358 360anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 326first strand
Strand 2
B
384 386anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
753 758first strand
Strand 2
B
745 750anti-parallel
Strand 3
B
708 711anti-parallel
Strand 4
B
447 450parallel
Strand 5
B
681 687parallel
Strand 6
B
649 654parallel
Strand 7
B
474 479parallel
Strand 8
B
614 618parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il