Analysis of interatomic Contacts of Structural Units in PDB entry:
7O4D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O4D entry

There are 2 chains in PDB entry 7O4D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLY 230
B
 ALA 2GLY 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7O4D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 33Right-handed alpha
Helix 2
AA2
A
52 56Right-handed 310
Helix 3
AA3
A
67 78Right-handed alpha
Helix 4
AA4
A
82 95Right-handed alpha
Helix 5
AA5
A
110 121Right-handed alpha
Helix 6
AA6
A
132 136Right-handed 310
Helix 7
AA7
A
164 174Right-handed alpha
Helix 8
AA8
A
177 181Right-handed 310
Helix 9
AA9
A
197 214Right-handed alpha
Helix 10
AB1
A
215 218Right-handed 310
Helix 11
AB2
A
224 230Right-handed alpha
Helix 12
AB3
B
17 33Right-handed alpha
Helix 13
AB4
B
52 56Right-handed 310
Helix 14
AB5
B
67 79Right-handed alpha
Helix 15
AB6
B
82 95Right-handed alpha
Helix 16
AB7
B
110 121Right-handed alpha
Helix 17
AB8
B
132 136Right-handed 310
Helix 18
AB9
B
153 157Right-handed 310
Helix 19
AC1
B
164 174Right-handed alpha
Helix 20
AC2
B
197 214Right-handed alpha
Helix 21
AC3
B
215 218Right-handed 310
Helix 22
AC4
B
224 230Right-handed alpha
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There are 4 sheets in PDB entry 7O4D. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
5 10parallel
Strand 3
A
97 103parallel
Strand 4
A
142 148parallel
Strand 5
A
183 184parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
5 10parallel
Strand 3
A
97 103parallel
Strand 4
A
142 148parallel
Strand 5
A
188 190parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 41first strand
Strand 2
B
5 10parallel
Strand 3
B
97 103parallel
Strand 4
B
142 149parallel
Strand 5
B
183 184parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 41first strand
Strand 2
B
5 10parallel
Strand 3
B
97 103parallel
Strand 4
B
142 149parallel
Strand 5
B
188 191parallel
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