Analysis of interatomic Contacts of Structural Units in PDB entry:
7O5H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7O5H entry

There are 15 chains in PDB entry 7O5H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
V	ASN 18	ALA 268
A	A 1	G 1530
B	THR 3	GLN 227
D	ALA 2	LYS 206
E	GLU 10	LYS 167
F	MET 1	VAL 103
H	SER 2	ALA 130
K	ARG 13	VAL 129
L	ALA 2	ALA 124
O	SER 2	ARG 88
P	MET 1	ALA 82
Q	LYS 4	ALA 82
R	GLU 20	HIS 74
T	ALA 2	ALA 87
U	VAL 28	ALA 57

There are 69 helices in PDB entry 7O5H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	V	22	34	Right-handed alpha
Helix 2	AA2	V	51	56	Right-handed alpha
Helix 3	AA3	V	68	77	Right-handed alpha
Helix 4	AA4	V	96	105	Right-handed alpha
Helix 5	AA5	V	115	128	Right-handed alpha
Helix 6	AA6	V	141	150	Right-handed alpha
Helix 7	AA7	V	158	167	Right-handed alpha
Helix 8	AA8	V	177	179	Right-handed 310
Helix 9	AA9	V	206	218	Right-handed alpha
Helix 10	AB1	V	219	221	Right-handed 310
Helix 11	AB2	V	224	229	Right-handed alpha
Helix 12	AB3	V	234	241	Right-handed alpha
Helix 13	AB4	V	248	252	Right-handed 310
Helix 14	AB5	V	253	268	Right-handed alpha
Helix 15	AB6	B	5	13	Right-handed alpha
Helix 16	AB7	B	24	29	Right-handed 310
Helix 17	AB8	B	42	63	Right-handed alpha
Helix 18	AB9	B	73	87	Right-handed alpha
Helix 19	AC1	B	103	123	Right-handed alpha
Helix 20	AC2	B	132	149	Right-handed alpha
Helix 21	AC3	B	150	152	Right-handed 310
Helix 22	AC4	B	169	180	Right-handed alpha
Helix 23	AC5	B	192	196	Right-handed 310
Helix 24	AC6	B	206	227	Right-handed alpha
Helix 25	AC7	D	7	16	Right-handed alpha
Helix 26	AC8	D	27	32	Right-handed alpha
Helix 27	AC9	D	39	43	Right-handed 310
Helix 28	AD1	D	49	66	Right-handed alpha
Helix 29	AD2	D	68	82	Right-handed alpha
Helix 30	AD3	D	85	96	Right-handed alpha
Helix 31	AD4	D	97	105	Right-handed alpha
Helix 32	AD5	D	110	120	Right-handed alpha
Helix 33	AD6	D	147	150	Right-handed 310
Helix 34	AD7	D	152	165	Right-handed alpha
Helix 35	AD8	D	197	206	Right-handed alpha
Helix 36	AD9	E	55	69	Right-handed alpha
Helix 37	AE1	E	108	119	Right-handed alpha
Helix 38	AE2	E	132	146	Right-handed alpha
Helix 39	AE3	E	149	157	Right-handed alpha
Helix 40	AE4	E	160	165	Right-handed alpha
Helix 41	AE5	F	12	16	Right-handed 310
Helix 42	AE6	F	17	32	Right-handed alpha
Helix 43	AE7	F	67	80	Right-handed alpha
Helix 44	AE8	H	5	20	Right-handed alpha
Helix 45	AE9	H	30	44	Right-handed alpha
Helix 46	AF1	H	88	92	Right-handed 310
Helix 47	AF2	H	94	99	Right-handed 310
Helix 48	AF3	H	113	120	Right-handed alpha
Helix 49	AF4	K	48	51	Right-handed 310
Helix 50	AF5	K	59	75	Right-handed alpha
Helix 51	AF6	K	76	78	Right-handed 310
Helix 52	AF7	K	92	103	Right-handed alpha
Helix 53	AF8	L	3	10	Right-handed alpha
Helix 54	AF9	L	113	117	Right-handed 310
Helix 55	AG1	O	4	16	Right-handed alpha
Helix 56	AG2	O	24	46	Right-handed alpha
Helix 57	AG3	O	49	74	Right-handed alpha
Helix 58	AG4	O	74	86	Right-handed alpha
Helix 59	AG5	P	53	63	Right-handed alpha
Helix 60	AG6	P	68	82	Right-handed alpha
Helix 61	AG7	Q	49	52	Right-handed 310
Helix 62	AG8	R	25	31	Right-handed alpha
Helix 63	AG9	R	41	46	Right-handed alpha
Helix 64	AH1	R	48	65	Right-handed alpha
Helix 65	AH2	T	4	42	Right-handed alpha
Helix 66	AH3	T	43	64	Right-handed alpha
Helix 67	AH4	T	68	87	Right-handed alpha
Helix 68	AH5	U	29	36	Right-handed alpha
Helix 69	AH6	U	40	55	Right-handed alpha

There are 15 sheets in PDB entry 7O5H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	19	20	first strand
Strand 2	V	181	182	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	85	89	first strand
Strand 2	V	62	66	parallel
Strand 3	V	41	44	parallel
Strand 4	V	108	111	parallel
Strand 5	V	133	140	parallel
Strand 6	V	189	196	anti-parallel
Strand 7	V	168	176	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	19	first strand
Strand 2	B	38	41	anti-parallel
Strand 3	B	31	35	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	67	70	parallel
Strand 3	B	160	164	parallel
Strand 4	B	183	186	parallel
Strand 5	B	198	200	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	129	first strand
Strand 2	D	123	125	anti-parallel
Strand 3	D	141	145	anti-parallel
Strand 4	D	179	182	anti-parallel
Strand 5	D	171	174	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	12	24	first strand
Strand 2	E	29	40	anti-parallel
Strand 3	E	45	53	anti-parallel
Strand 4	E	72	73	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	88	first strand
Strand 2	E	92	98	anti-parallel
Strand 3	E	123	129	anti-parallel
Strand 4	E	105	106	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	51	first strand
Strand 2	F	54	66	anti-parallel
Strand 3	F	2	10	anti-parallel
Strand 4	F	84	92	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	24	28	first strand
Strand 2	H	58	62	anti-parallel
Strand 3	H	49	52	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	74	77	first strand
Strand 2	H	123	130	anti-parallel
Strand 3	H	86	87	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	74	77	first strand
Strand 2	H	123	130	anti-parallel
Strand 3	H	101	106	anti-parallel
Strand 4	H	109	112	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	41	46	first strand
Strand 2	K	30	35	anti-parallel
Strand 3	K	18	25	anti-parallel
Strand 4	K	81	87	parallel
Strand 5	K	106	112	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	62	66	first strand
Strand 2	L	50	57	anti-parallel
Strand 3	L	30	40	anti-parallel
Strand 4	L	78	82	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	50	52	first strand
Strand 2	P	34	39	anti-parallel
Strand 3	P	16	23	anti-parallel
Strand 4	P	2	9	anti-parallel
Strand 5	P	66	67	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	8	14	first strand
Strand 2	Q	20	30	anti-parallel
Strand 3	Q	37	47	anti-parallel
Strand 4	Q	71	78	parallel
Strand 5	Q	58	63	anti-parallel
Strand 6	Q	8	14	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7O5H

Analysis of interatomic Contacts of Structural Units in PDB entry:
7O5H