Analysis of interatomic Contacts of Structural Units in PDB entry:
7O7A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O7A entry

There are 2 chains in PDB entry 7O7A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 37ASN 444
B
 GLY 38ASN 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 7O7A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 52Right-handed alpha
Helix 2
AA2
A
219 222Right-handed 310
Helix 3
AA3
A
312 316Right-handed 310
Helix 4
AA4
A
426 428Right-handed 310
Helix 5
AA5
A
431 436Right-handed alpha
Helix 6
AA6
B
45 51Right-handed alpha
Helix 7
AA7
B
219 222Right-handed 310
Helix 8
AA8
B
312 316Right-handed 310
Helix 9
AA9
B
426 428Right-handed 310
Helix 10
AB1
B
431 436Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 7O7A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 43first strand
Strand 2
A
59 62parallel
Strand 3
A
84 88parallel
Strand 4
A
109 112parallel
Strand 5
A
137 139parallel
Strand 6
A
166 168parallel
Strand 7
A
194 196parallel
Strand 8
A
229 231parallel
Strand 9
A
253 255parallel
Strand 10
A
275 277parallel
Strand 11
A
300 302parallel
Strand 12
A
339 341parallel
Strand 13
A
370 372parallel
Strand 14
A
393 395parallel
Back to list of sheets
Back to top of page

There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
94 98parallel
Strand 3
A
114 119parallel
Strand 4
A
142 144parallel
Strand 5
A
171 173parallel
Strand 6
A
199 200parallel
Strand 7
A
234 236parallel
Strand 8
A
258 260parallel
Strand 9
A
280 282parallel
Strand 10
A
305 307parallel
Strand 11
A
344 346parallel
Strand 12
A
375 377parallel
Strand 13
A
397 399parallel
Strand 14
A
408 410parallel
Back to list of sheets
Back to top of page

There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 75first strand
Strand 2
A
101 105parallel
Strand 3
A
127 129parallel
Strand 4
A
158 160parallel
Strand 5
A
182 184parallel
Strand 6
A
214 217parallel
Strand 7
A
243 248parallel
Strand 8
A
265 270parallel
Strand 9
A
292 294parallel
Strand 10
A
318 321parallel
Strand 11
A
350 356parallel
Strand 12
A
381 385parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 418first strand
Strand 2
A
421 424anti-parallel
Back to list of sheets
Back to top of page

There are 14 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 43first strand
Strand 2
B
59 62parallel
Strand 3
B
84 88parallel
Strand 4
B
109 112parallel
Strand 5
B
137 139parallel
Strand 6
B
166 168parallel
Strand 7
B
194 196parallel
Strand 8
B
229 231parallel
Strand 9
B
253 255parallel
Strand 10
B
275 277parallel
Strand 11
B
300 302parallel
Strand 12
B
339 341parallel
Strand 13
B
370 372parallel
Strand 14
B
393 395parallel
Back to list of sheets
Back to top of page

There are 14 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 68first strand
Strand 2
B
94 98parallel
Strand 3
B
114 119parallel
Strand 4
B
142 144parallel
Strand 5
B
171 173parallel
Strand 6
B
199 200parallel
Strand 7
B
234 236parallel
Strand 8
B
258 260parallel
Strand 9
B
280 282parallel
Strand 10
B
305 307parallel
Strand 11
B
344 346parallel
Strand 12
B
375 377parallel
Strand 13
B
397 399parallel
Strand 14
B
408 410parallel
Back to list of sheets
Back to top of page

There are 12 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 75first strand
Strand 2
B
101 105parallel
Strand 3
B
127 129parallel
Strand 4
B
158 160parallel
Strand 5
B
182 184parallel
Strand 6
B
214 217parallel
Strand 7
B
243 248parallel
Strand 8
B
265 270parallel
Strand 9
B
292 294parallel
Strand 10
B
318 320parallel
Strand 11
B
350 354parallel
Strand 12
B
381 385parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
415 418first strand
Strand 2
B
421 424anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il