Analysis of interatomic Contacts of Structural Units in PDB entry:
7O8B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O8B entry

There is 1 chain in PDB entry 7O8B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 4LEU 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7O8B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 49Right-handed 310
Helix 2
AA2
A
51 56Right-handed alpha
Helix 3
AA3
A
80 95Right-handed alpha
Helix 4
AA4
A
106 119Right-handed alpha
Helix 5
AA5
A
137 141Right-handed 310
Helix 6
AA6
A
142 144Right-handed 310
Helix 7
AA7
A
145 153Right-handed alpha
Helix 8
AA8
A
156 163Right-handed alpha
Helix 9
AA9
A
166 171Right-handed alpha
Helix 10
AB1
A
171 176Right-handed alpha
Helix 11
AB2
A
182 191Right-handed alpha
Helix 12
AB3
A
192 194Right-handed 310
Helix 13
AB4
A
195 198Right-handed 310
Helix 14
AB5
A
199 205Right-handed alpha
Helix 15
AB6
A
215 231Right-handed alpha
Helix 16
AB7
A
248 259Right-handed alpha
Helix 17
AB8
A
273 278Right-handed alpha
Helix 18
AB9
A
278 290Right-handed alpha
Helix 19
AC1
A
291 293Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7O8B.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 17first strand
Strand 2
A
20 27anti-parallel
Strand 3
A
61 64anti-parallel
Strand 4
A
35 38parallel
Strand 5
A
100 105parallel
Strand 6
A
123 129parallel
Strand 7
A
236 243parallel
Strand 8
A
262 270parallel
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