Analysis of interatomic Contacts of Structural Units in PDB entry:
7O9F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O9F entry

There are 3 chains in PDB entry 7O9F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 300
B
 HIS 0ASP 300
C
 MET 1ASP 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7O9F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 20Right-handed alpha
Helix 2
AA2
A
24 42Right-handed alpha
Helix 3
AA3
A
45 61Right-handed alpha
Helix 4
AA4
A
62 67Right-handed alpha
Helix 5
AA5
A
70 88Right-handed alpha
Helix 6
AA6
A
113 130Right-handed alpha
Helix 7
AA7
A
144 157Right-handed alpha
Helix 8
AA8
A
168 184Right-handed alpha
Helix 9
AA9
A
199 214Right-handed alpha
Helix 10
AB1
A
227 241Right-handed alpha
Helix 11
AB2
A
250 254Right-handed 310
Helix 12
AB3
A
257 268Right-handed alpha
Helix 13
AB4
A
287 296Right-handed alpha
Helix 14
AB5
B
3 20Right-handed alpha
Helix 15
AB6
B
24 42Right-handed alpha
Helix 16
AB7
B
45 67Right-handed alpha
Helix 17
AB8
B
70 87Right-handed alpha
Helix 18
AB9
B
113 130Right-handed alpha
Helix 19
AC1
B
144 157Right-handed alpha
Helix 20
AC2
B
168 183Right-handed alpha
Helix 21
AC3
B
199 214Right-handed alpha
Helix 22
AC4
B
227 241Right-handed alpha
Helix 23
AC5
B
250 254Right-handed 310
Helix 24
AC6
B
257 268Right-handed alpha
Helix 25
AC7
B
287 297Right-handed alpha
Helix 26
AC8
C
3 19Right-handed alpha
Helix 27
AC9
C
24 42Right-handed alpha
Helix 28
AD1
C
45 61Right-handed alpha
Helix 29
AD2
C
70 87Right-handed alpha
Helix 30
AD3
C
113 128Right-handed alpha
Helix 31
AD4
C
144 156Right-handed alpha
Helix 32
AD5
C
169 182Right-handed alpha
Helix 33
AD6
C
199 208Right-handed alpha
Helix 34
AD7
C
227 241Right-handed alpha
Helix 35
AD8
C
250 254Right-handed 310
Helix 36
AD9
C
257 268Right-handed alpha
Helix 37
AE1
C
287 296Right-handed alpha
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There are 3 sheets in PDB entry 7O9F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
133 138parallel
Strand 3
A
187 192parallel
Strand 4
A
102 107parallel
Strand 5
A
217 223parallel
Strand 6
A
245 249parallel
Strand 7
A
271 275parallel
Strand 8
A
283 285anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 161first strand
Strand 2
B
133 137parallel
Strand 3
B
187 191parallel
Strand 4
B
102 107parallel
Strand 5
B
217 223parallel
Strand 6
B
245 249parallel
Strand 7
B
271 275parallel
Strand 8
B
283 285anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 161first strand
Strand 2
C
134 136parallel
Strand 3
C
187 191parallel
Strand 4
C
102 107parallel
Strand 5
C
217 223parallel
Strand 6
C
245 249parallel
Strand 7
C
271 275parallel
Strand 8
C
283 285anti-parallel
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