Analysis of interatomic Contacts of Structural Units in PDB entry:
7O9L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O9L entry

There are 2 chains in PDB entry 7O9L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 306
B
 MET 1LEU 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7O9L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 52Right-handed alpha
Helix 2
AA2
A
53 56Right-handed 310
Helix 3
AA3
A
64 72Right-handed alpha
Helix 4
AA4
A
83 88Right-handed 310
Helix 5
AA5
A
107 123Right-handed alpha
Helix 6
AA6
A
138 142Right-handed 310
Helix 7
AA7
A
155 165Right-handed alpha
Helix 8
AA8
A
186 191Right-handed alpha
Helix 9
AA9
A
194 203Right-handed alpha
Helix 10
AB1
A
213 217Right-handed 310
Helix 11
AB2
A
221 227Right-handed alpha
Helix 12
AB3
A
261 273Right-handed alpha
Helix 13
AB4
A
281 285Right-handed 310
Helix 14
AB5
A
299 305Right-handed alpha
Helix 15
AB6
B
27 52Right-handed alpha
Helix 16
AB7
B
53 56Right-handed 310
Helix 17
AB8
B
64 72Right-handed alpha
Helix 18
AB9
B
83 88Right-handed 310
Helix 19
AC1
B
107 123Right-handed alpha
Helix 20
AC2
B
138 142Right-handed 310
Helix 21
AC3
B
155 165Right-handed alpha
Helix 22
AC4
B
186 191Right-handed alpha
Helix 23
AC5
B
194 203Right-handed alpha
Helix 24
AC6
B
213 217Right-handed 310
Helix 25
AC7
B
221 227Right-handed alpha
Helix 26
AC8
B
261 273Right-handed alpha
Helix 27
AC9
B
281 285Right-handed 310
Helix 28
AD1
B
299 305Right-handed alpha
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There are 8 sheets in PDB entry 7O9L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
99 105anti-parallel
Strand 3
A
13 21anti-parallel
Strand 4
A
127 136anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
251 259anti-parallel
Strand 3
A
176 185anti-parallel
Strand 4
A
287 289anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 245first strand
Strand 2
A
251 259anti-parallel
Strand 3
A
176 185anti-parallel
Strand 4
A
293 297anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
233 234anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 63first strand
Strand 2
B
99 105anti-parallel
Strand 3
B
13 21anti-parallel
Strand 4
B
127 136anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 239first strand
Strand 2
B
251 259anti-parallel
Strand 3
B
176 185anti-parallel
Strand 4
B
287 289anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 245first strand
Strand 2
B
251 259anti-parallel
Strand 3
B
176 185anti-parallel
Strand 4
B
293 297anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 230first strand
Strand 2
B
233 234anti-parallel
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