Analysis of interatomic Contacts of Structural Units in PDB entry:
7O9W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O9W entry

There are 3 chains in PDB entry 7O9W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 32GLY 1276
B
 GLN 1CYS 220
C
 GLU 1THR 225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7O9W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 40Right-handed alpha
Helix 2
AA2
A
44 89Right-handed alpha
Helix 3
AA3
A
105 157Right-handed alpha
Helix 4
AA4
A
159 166Right-handed alpha
Helix 5
AA5
A
167 187Right-handed alpha
Helix 6
AA6
A
188 211Right-handed alpha
Helix 7
AA7
A
211 238Right-handed alpha
Helix 8
AA8
A
240 260Right-handed alpha
Helix 9
AA9
A
262 268Right-handed alpha
Helix 10
AB1
A
269 323Right-handed alpha
Helix 11
AB2
A
327 348Right-handed alpha
Helix 12
AB3
A
348 371Right-handed alpha
Helix 13
AB4
A
432 441Right-handed alpha
Helix 14
AB5
A
457 461Right-handed 310
Helix 15
AB6
A
462 469Right-handed alpha
Helix 16
AB7
A
483 490Right-handed alpha
Helix 17
AB8
A
496 508Right-handed alpha
Helix 18
AB9
A
510 516Right-handed alpha
Helix 19
AC1
A
525 529Right-handed 310
Helix 20
AC2
A
532 546Right-handed alpha
Helix 21
AC3
A
562 576Right-handed alpha
Helix 22
AC4
A
611 617Right-handed alpha
Helix 23
AC5
A
620 630Right-handed alpha
Helix 24
AC6
A
699 703Right-handed 310
Helix 25
AC7
A
704 706Right-handed 310
Helix 26
AC8
A
707 741Right-handed alpha
Helix 27
AC9
A
744 798Right-handed alpha
Helix 28
AD1
A
800 805Right-handed alpha
Helix 29
AD2
A
810 854Right-handed alpha
Helix 30
AD3
A
854 863Right-handed alpha
Helix 31
AD4
A
864 880Right-handed alpha
Helix 32
AD5
A
884 893Right-handed alpha
Helix 33
AD6
A
894 903Right-handed alpha
Helix 34
AD7
A
903 911Right-handed alpha
Helix 35
AD8
A
912 966Right-handed alpha
Helix 36
AD9
A
970 995Right-handed alpha
Helix 37
AE1
A
998 1014Right-handed alpha
Helix 38
AE2
A
1077 1084Right-handed alpha
Helix 39
AE3
A
1105 1113Right-handed alpha
Helix 40
AE4
A
1126 1133Right-handed alpha
Helix 41
AE5
A
1141 1152Right-handed alpha
Helix 42
AE6
A
1154 1161Right-handed alpha
Helix 43
AE7
A
1170 1174Right-handed 310
Helix 44
AE8
A
1177 1191Right-handed alpha
Helix 45
AE9
A
1207 1222Right-handed alpha
Helix 46
AF1
A
1234 1239Right-handed alpha
Helix 47
AF2
A
1256 1263Right-handed alpha
Helix 48
AF3
A
1265 1272Right-handed alpha
Helix 49
AF4
B
127 133Right-handed alpha
Helix 50
AF5
B
190 195Right-handed alpha
Helix 51
AF6
C
87 91Right-handed 310
Helix 52
AF7
C
163 167Right-handed 310
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There are 13 sheets in PDB entry 7O9W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 417first strand
Strand 2
A
392 398anti-parallel
Strand 3
A
448 453anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 473first strand
Strand 2
A
551 555parallel
Strand 3
A
581 585parallel
Strand 4
A
422 426parallel
Strand 5
A
597 602parallel
Strand 6
A
605 608anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1056 1060first strand
Strand 2
A
1035 1041anti-parallel
Strand 3
A
1091 1096anti-parallel
Strand 4
A
1099 1100anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1114 1116first strand
Strand 2
A
1196 1200parallel
Strand 3
A
1226 1230parallel
Strand 4
A
1066 1069parallel
Strand 5
A
1242 1247parallel
Strand 6
A
1250 1253anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 6first strand
Strand 2
B
19 24anti-parallel
Strand 3
B
75 80anti-parallel
Strand 4
B
67 72anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
108 110parallel
Strand 3
B
90 95anti-parallel
Strand 4
B
38 43anti-parallel
Strand 5
B
50 53anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
108 110parallel
Strand 3
B
90 95anti-parallel
Strand 4
B
103 104anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 123first strand
Strand 2
B
135 143anti-parallel
Strand 3
B
182 188anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 160first strand
Strand 2
B
154 156anti-parallel
Strand 3
B
199 200anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 6first strand
Strand 2
C
19 25anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
68 73anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 12first strand
Strand 2
C
116 120parallel
Strand 3
C
93 99anti-parallel
Strand 4
C
33 39anti-parallel
Strand 5
C
45 52anti-parallel
Strand 6
C
58 60anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 132first strand
Strand 2
C
145 154anti-parallel
Strand 3
C
183 192anti-parallel
Strand 4
C
172 180anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
203 206first strand
Strand 2
C
215 218anti-parallel
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