Analysis of interatomic Contacts of Structural Units in PDB entry:
7OA6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OA6 entry

There are 5 chains in PDB entry 7OA6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 63ASN 214
B
 TYR 63ASN 214
I
 TYR 63ASN 214
J
 ASN 76LEU 191
X
 VAL 201ASN 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 7OA6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 73Right-handed alpha
Helix 2
AA2
B
65 74Right-handed alpha
Helix 3
AA3
I
66 71Right-handed alpha
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There are 8 sheets in PDB entry 7OA6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 99first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
183 189anti-parallel
Strand 4
A
176 180anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 124first strand
Strand 2
A
129 135anti-parallel
Strand 3
A
157 163anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 150first strand
Strand 2
B
96 99anti-parallel
Strand 3
B
104 109anti-parallel
Strand 4
B
183 188anti-parallel
Strand 5
B
176 180anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 123first strand
Strand 2
B
129 135anti-parallel
Strand 3
B
157 163anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
89 90first strand
Strand 2
I
157 163anti-parallel
Strand 3
I
129 135anti-parallel
Strand 4
I
120 124anti-parallel
Strand 5
X
203 204anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
95 96first strand
Strand 2
I
103 108anti-parallel
Strand 3
I
183 189anti-parallel
Strand 4
I
176 180anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
97 98first strand
Strand 2
J
105 109anti-parallel
Strand 3
J
183 187anti-parallel
Strand 4
J
176 180anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
119 123first strand
Strand 2
J
130 135anti-parallel
Strand 3
J
157 161anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il