Analysis of interatomic Contacts of Structural Units in PDB entry:
7OAT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OAT entry

There are 4 chains in PDB entry 7OAT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 319ARG 496
B
 PRO 23GLU 314
B
 THR 316PRO 461
C
 LEU 13LYS 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7OAT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
326 330Right-handed 310
Helix 2
AA2
A
348 365Right-handed alpha
Helix 3
AA3
A
373 388Right-handed alpha
Helix 4
AA4
A
412 423Right-handed alpha
Helix 5
AA5
A
473 479Right-handed alpha
Helix 6
AA6
A
482 496Right-handed alpha
Helix 7
AA7
B
43 49Right-handed alpha
Helix 8
AA8
B
85 93Right-handed alpha
Helix 9
AA9
B
120 124Right-handed 310
Helix 10
AB1
B
129 134Right-handed alpha
Helix 11
AB2
B
134 140Right-handed alpha
Helix 12
AB3
B
202 206Right-handed 310
Helix 13
AB4
B
209 226Right-handed alpha
Helix 14
AB5
B
226 234Right-handed alpha
Helix 15
AB6
B
250 262Right-handed alpha
Helix 16
AB7
B
271 277Right-handed alpha
Helix 17
AB8
B
280 296Right-handed alpha
Helix 18
AB9
B
305 310Right-handed alpha
Helix 19
AC1
B
323 334Right-handed alpha
Helix 20
AC2
B
349 353Right-handed 310
Helix 21
AC3
B
354 359Right-handed 310
Helix 22
AC4
B
373 384Right-handed alpha
Helix 23
AC5
B
395 402Right-handed alpha
Helix 24
AC6
B
407 426Right-handed alpha
Helix 25
AC7
B
439 444Right-handed alpha
Helix 26
AC8
B
448 459Right-handed alpha
Helix 27
AC9
C
37 41Right-handed 310
Helix 28
AD1
C
43 54Right-handed alpha
Helix 29
AD2
C
55 60Right-handed alpha
Helix 30
AD3
C
79 88Right-handed alpha
Helix 31
AD4
C
97 99Right-handed 310
Helix 32
AD5
C
100 112Right-handed alpha
Helix 33
AD6
C
113 115Right-handed 310
Helix 34
AD7
C
148 153Right-handed alpha
Helix 35
AD8
C
153 163Right-handed alpha
Helix 36
AD9
C
180 193Right-handed alpha
Helix 37
AE1
C
202 206Right-handed 310
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There are 8 sheets in PDB entry 7OAT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
402 407anti-parallel
Strand 3
A
391 396anti-parallel
Strand 4
A
457 464parallel
Strand 5
A
431 435anti-parallel
Strand 6
A
440 441anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 29first strand
Strand 2
B
81 84parallel
Strand 3
B
38 42anti-parallel
Strand 4
B
66 74parallel
Strand 5
B
56 60anti-parallel
Strand 6
B
99 104anti-parallel
Strand 7
B
24 29anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 156first strand
Strand 2
B
159 169anti-parallel
Strand 3
B
113 118anti-parallel
Strand 4
B
181 183parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 127first strand
Strand 2
B
437 438parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 147first strand
Strand 2
B
173 176anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 270first strand
Strand 2
B
299 304parallel
Strand 3
B
341 347parallel
Strand 4
B
240 244parallel
Strand 5
B
363 368parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 21first strand
Strand 2
C
27 33anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
118 123first strand
Strand 2
C
91 96parallel
Strand 3
C
70 74parallel
Strand 4
C
139 143parallel
Strand 5
C
168 174parallel
Strand 6
C
215 222anti-parallel
Strand 7
C
196 200anti-parallel
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