Analysis of interatomic Contacts of Structural Units in PDB entry:
7OBA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OBA entry

There are 14 chains in PDB entry 7OBA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 5	LEU 1719
B	MET 1	VAL 1134
C	ASP 38	ASP 346
E	MET 1	GLN 210
F	LYS 50	ASP 127
G	GLU 30	GLY 196
H	ALA 2	PHE 150
I	SER 11	SER 126
J	MET 1	PRO 64
K	LYS 24	GLU 130
L	GLN 13	ARG 58
M	LEU 6	ASP 115
N	SER 13	PRO 161
O	GLN 108	SER 585

There are147 helices in PDB entry 7OBA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	92	99	Right-handed alpha
Helix 2	AA2	A	113	124	Right-handed alpha
Helix 3	AA3	A	136	149	Right-handed alpha
Helix 4	AA4	A	158	171	Right-handed alpha
Helix 5	AA5	A	181	199	Right-handed alpha
Helix 6	AA6	A	257	273	Right-handed alpha
Helix 7	AA7	A	284	288	Right-handed 310
Helix 8	AA8	A	306	310	Right-handed 310
Helix 9	AA9	A	324	346	Right-handed alpha
Helix 10	AB1	A	387	403	Right-handed alpha
Helix 11	AB2	A	416	422	Right-handed alpha
Helix 12	AB3	A	481	486	Right-handed alpha
Helix 13	AB4	A	512	521	Right-handed alpha
Helix 14	AB5	A	557	559	Right-handed 310
Helix 15	AB6	A	580	584	Right-handed 310
Helix 16	AB7	A	605	611	Right-handed alpha
Helix 17	AB8	A	633	642	Right-handed alpha
Helix 18	AB9	A	649	661	Right-handed alpha
Helix 19	AC1	A	684	694	Right-handed alpha
Helix 20	AC2	A	750	755	Right-handed alpha
Helix 21	AC3	A	760	765	Right-handed alpha
Helix 22	AC4	A	773	787	Right-handed alpha
Helix 23	AC5	A	817	821	Right-handed 310
Helix 24	AC6	A	824	829	Right-handed alpha
Helix 25	AC7	A	838	850	Right-handed alpha
Helix 26	AC8	A	861	869	Right-handed alpha
Helix 27	AC9	A	872	881	Right-handed alpha
Helix 28	AD1	A	892	900	Right-handed alpha
Helix 29	AD2	A	907	914	Right-handed alpha
Helix 30	AD3	A	944	949	Right-handed 310
Helix 31	AD4	A	960	980	Right-handed alpha
Helix 32	AD5	A	986	996	Right-handed alpha
Helix 33	AD6	A	1018	1022	Right-handed 310
Helix 34	AD7	A	1026	1030	Right-handed 310
Helix 35	AD8	A	1033	1036	Right-handed 310
Helix 36	AD9	A	1037	1042	Right-handed alpha
Helix 37	AE1	A	1043	1048	Right-handed alpha
Helix 38	AE2	A	1061	1065	Right-handed 310
Helix 39	AE3	A	1067	1076	Right-handed alpha
Helix 40	AE4	A	1087	1097	Right-handed alpha
Helix 41	AE5	A	1116	1126	Right-handed alpha
Helix 42	AE6	A	1133	1138	Right-handed alpha
Helix 43	AE7	A	1160	1178	Right-handed alpha
Helix 44	AE8	A	1188	1203	Right-handed alpha
Helix 45	AE9	A	1210	1215	Right-handed alpha
Helix 46	AF1	A	1244	1253	Right-handed alpha
Helix 47	AF2	A	1272	1284	Right-handed alpha
Helix 48	AF3	A	1289	1293	Right-handed alpha
Helix 49	AF4	A	1323	1327	Right-handed 310
Helix 50	AF5	A	1336	1345	Right-handed alpha
Helix 51	AF6	A	1346	1358	Right-handed alpha
Helix 52	AF7	A	1502	1507	Right-handed alpha
Helix 53	AF8	A	1542	1548	Right-handed alpha
Helix 54	AF9	A	1584	1589	Right-handed alpha
Helix 55	AG1	A	1596	1600	Right-handed 310
Helix 56	AG2	A	1620	1630	Right-handed alpha
Helix 57	AG3	A	1637	1649	Right-handed alpha
Helix 58	AG4	A	1667	1675	Right-handed alpha
Helix 59	AG5	A	1678	1687	Right-handed alpha
Helix 60	AG6	A	1697	1701	Right-handed 310
Helix 61	AG7	B	39	49	Right-handed alpha
Helix 62	AG8	B	51	56	Right-handed alpha
Helix 63	AG9	B	99	106	Right-handed alpha
Helix 64	AH1	B	152	158	Right-handed alpha
Helix 65	AH2	B	196	201	Right-handed 310
Helix 66	AH3	B	248	257	Right-handed alpha
Helix 67	AH4	B	260	268	Right-handed alpha
Helix 68	AH5	B	276	292	Right-handed alpha
Helix 69	AH6	B	296	308	Right-handed alpha
Helix 70	AH7	B	326	331	Right-handed alpha
Helix 71	AH8	B	338	358	Right-handed alpha
Helix 72	AH9	B	368	370	Right-handed 310
Helix 73	AI1	B	378	405	Right-handed alpha
Helix 74	AI2	B	427	437	Right-handed alpha
Helix 75	AI3	B	461	467	Right-handed alpha
Helix 76	AI4	B	484	488	Right-handed 310
Helix 77	AI5	B	490	494	Right-handed 310
Helix 78	AI6	B	528	537	Right-handed alpha
Helix 79	AI7	B	571	576	Right-handed alpha
Helix 80	AI8	B	637	641	Right-handed 310
Helix 81	AI9	B	668	673	Right-handed alpha
Helix 82	AJ1	B	681	689	Right-handed alpha
Helix 83	AJ2	B	725	730	Right-handed alpha
Helix 84	AJ3	B	761	767	Right-handed alpha
Helix 85	AJ4	B	800	804	Right-handed 310
Helix 86	AJ5	B	898	902	Right-handed 310
Helix 87	AJ6	B	926	940	Right-handed alpha
Helix 88	AJ7	B	961	969	Right-handed alpha
Helix 89	AJ8	B	1038	1049	Right-handed alpha
Helix 90	AJ9	B	1050	1060	Right-handed alpha
Helix 91	AK1	B	1115	1124	Right-handed alpha
Helix 92	AK2	C	41	46	Right-handed alpha
Helix 93	AK3	C	69	83	Right-handed alpha
Helix 94	AK4	C	104	112	Right-handed alpha
Helix 95	AK5	C	118	122	Right-handed 310
Helix 96	AK6	C	158	162	Right-handed alpha
Helix 97	AK7	C	169	171	Right-handed 310
Helix 98	AK8	C	180	185	Right-handed alpha
Helix 99	AK9	C	222	226	Right-handed 310
Helix 100	AL1	C	246	248	Right-handed 310
Helix 101	AL2	C	249	257	Right-handed alpha
Helix 102	AL3	C	277	281	Right-handed 310
Helix 103	AL4	C	285	290	Right-handed 310
Helix 104	AL5	C	317	344	Right-handed alpha
Helix 105	AL6	E	4	22	Right-handed alpha
Helix 106	AL7	E	23	25	Right-handed 310
Helix 107	AL8	E	29	33	Right-handed 310
Helix 108	AL9	E	38	43	Right-handed alpha
Helix 109	AM1	E	89	96	Right-handed alpha
Helix 110	AM2	E	113	120	Right-handed alpha
Helix 111	AM3	E	133	136	Right-handed 310
Helix 112	AM4	E	138	142	Right-handed 310
Helix 113	AM5	E	152	163	Right-handed alpha
Helix 114	AM6	F	58	72	Right-handed alpha
Helix 115	AM7	F	88	99	Right-handed alpha
Helix 116	AM8	G	34	41	Right-handed alpha
Helix 117	AM9	G	67	77	Right-handed alpha
Helix 118	AN1	I	48	53	Right-handed 310
Helix 119	AN2	J	18	27	Right-handed alpha
Helix 120	AN3	J	35	39	Right-handed 310
Helix 121	AN4	J	44	51	Right-handed alpha
Helix 122	AN5	K	54	60	Right-handed alpha
Helix 123	AN6	K	92	116	Right-handed alpha
Helix 124	AN7	K	118	126	Right-handed alpha
Helix 125	AN8	M	52	57	Right-handed alpha
Helix 126	AN9	N	52	57	Right-handed 310
Helix 127	AO1	O	109	114	Right-handed alpha
Helix 128	AO2	O	127	139	Right-handed alpha
Helix 129	AO3	O	140	143	Right-handed 310
Helix 130	AO4	O	144	154	Right-handed alpha
Helix 131	AO5	O	182	197	Right-handed alpha
Helix 132	AO6	O	198	204	Right-handed alpha
Helix 133	AO7	O	204	211	Right-handed alpha
Helix 134	AO8	O	218	236	Right-handed alpha
Helix 135	AO9	O	239	257	Right-handed alpha
Helix 136	AP1	O	309	329	Right-handed alpha
Helix 137	AP2	O	342	355	Right-handed alpha
Helix 138	AP3	O	364	372	Right-handed alpha
Helix 139	AP4	O	375	392	Right-handed alpha
Helix 140	AP5	O	396	413	Right-handed alpha
Helix 141	AP6	O	418	440	Right-handed alpha
Helix 142	AP7	O	454	470	Right-handed alpha
Helix 143	AP8	O	483	485	Right-handed 310
Helix 144	AP9	O	486	496	Right-handed alpha
Helix 145	AQ1	O	506	520	Right-handed alpha
Helix 146	AQ2	O	554	559	Right-handed alpha
Helix 147	AQ3	O	570	575	Right-handed alpha

There are 44 sheets in PDB entry 7OBA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	19	first strand
Strand 2	B	1128	1133	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	32	first strand
Strand 2	A	79	88	parallel
Strand 3	A	298	302	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	218	first strand
Strand 2	A	222	225	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	436	437	first strand
Strand 2	B	1035	1036	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	447	first strand
Strand 2	A	575	577	parallel
Strand 3	A	455	458	anti-parallel
Strand 4	A	561	568	parallel
Strand 5	A	547	551	anti-parallel
Strand 6	A	593	597	anti-parallel
Strand 7	A	440	447	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	467	471	first strand
Strand 2	A	537	541	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	647	648	first strand
Strand 2	A	682	683	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	675	677	first strand
Strand 2	H	90	98	anti-parallel
Strand 3	H	140	147	anti-parallel
Strand 4	H	55	61	anti-parallel
Strand 5	H	4	15	anti-parallel
Strand 6	H	25	32	anti-parallel
Strand 7	H	38	44	anti-parallel
Strand 8	H	123	124	anti-parallel
Strand 9	H	115	117	anti-parallel
Strand 10	H	90	98	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	705	706	first strand
Strand 2	A	738	740	anti-parallel
Strand 3	A	743	746	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1007	1008	first strand
Strand 2	A	1014	1016	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1577	1580	first strand
Strand 2	A	1264	1267	anti-parallel
Strand 3	A	1601	1602	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1526	1527	first strand
Strand 2	A	1317	1321	anti-parallel
Strand 3	A	1294	1301	anti-parallel
Strand 4	I	55	60	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1304	1305	first strand
Strand 2	A	1311	1314	anti-parallel
Strand 3	A	1530	1531	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	115	119	first strand
Strand 2	F	105	109	anti-parallel
Strand 3	A	1713	1718	anti-parallel
Strand 4	G	102	105	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	67	first strand
Strand 2	B	72	75	anti-parallel
Strand 3	B	121	122	anti-parallel
Strand 4	B	125	126	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	82	first strand
Strand 2	B	111	118	anti-parallel
Strand 3	B	130	138	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	172	first strand
Strand 2	B	175	179	anti-parallel
Strand 3	B	454	456	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	375	first strand
Strand 2	B	181	185	anti-parallel
Strand 3	B	471	473	parallel
Strand 4	B	511	513	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	191	194	first strand
Strand 2	B	205	216	anti-parallel
Strand 3	B	220	229	anti-parallel
Strand 4	B	234	239	anti-parallel
Strand 5	B	244	245	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	520	first strand
Strand 2	B	619	625	anti-parallel
Strand 3	B	630	635	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	520	first strand
Strand 2	B	619	625	anti-parallel
Strand 3	B	658	660	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	539	541	first strand
Strand 2	B	561	567	anti-parallel
Strand 3	B	553	558	anti-parallel
Strand 4	B	609	613	parallel
Strand 5	B	594	598	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	710	714	first strand
Strand 2	B	771	780	anti-parallel
Strand 3	B	866	873	anti-parallel
Strand 4	B	847	854	anti-parallel
Strand 5	B	818	819	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	710	714	first strand
Strand 2	B	771	780	anti-parallel
Strand 3	B	866	873	anti-parallel
Strand 4	B	847	854	anti-parallel
Strand 5	L	44	46	anti-parallel
Strand 6	L	16	19	anti-parallel
Strand 7	L	25	27	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	722	723	first strand
Strand 2	B	945	946	parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	976	977	first strand
Strand 2	B	992	1001	anti-parallel
Strand 3	B	882	884	anti-parallel
Strand 4	B	891	897	anti-parallel
Strand 5	B	756	760	parallel
Strand 6	B	913	915	anti-parallel
Strand 7	B	739	745	parallel
Strand 8	B	992	1001	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	792	794	first strand
Strand 2	B	828	830	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	824	826	first strand
Strand 2	B	839	840	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1064	1070	first strand
Strand 2	B	1107	1113	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	57	first strand
Strand 2	C	60	66	anti-parallel
Strand 3	C	298	312	anti-parallel
Strand 4	C	228	240	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	175	first strand
Strand 2	C	140	144	anti-parallel
Strand 3	C	208	217	anti-parallel
Strand 4	C	86	95	anti-parallel
Strand 5	L	53	56	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	148	first strand
Strand 2	C	163	164	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	267	first strand
Strand 2	C	270	275	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	63	first strand
Strand 2	E	71	75	anti-parallel
Strand 3	E	101	106	parallel
Strand 4	E	126	131	parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	147	149	first strand
Strand 2	E	190	195	anti-parallel
Strand 3	E	203	210	anti-parallel
Strand 4	E	172	174	parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	54	first strand
Strand 2	G	116	119	anti-parallel
Strand 3	G	97	98	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	57	59	first strand
Strand 2	G	112	114	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	135	138	first strand
Strand 2	G	143	147	anti-parallel
Strand 3	G	151	155	anti-parallel
Strand 4	G	193	195	parallel
Strand 5	G	183	185	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	35	37	first strand
Strand 2	I	44	46	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	82	83	first strand
Strand 2	I	95	99	anti-parallel
Strand 3	I	111	115	anti-parallel
Strand 4	I	121	124	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	28	31	first strand
Strand 2	K	39	45	anti-parallel
Strand 3	K	79	85	anti-parallel
Strand 4	K	67	72	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	11	13	first strand
Strand 2	M	99	111	parallel
Strand 3	M	86	90	anti-parallel
Strand 4	N	46	47	anti-parallel

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There are 7 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	24	25	first strand
Strand 2	M	42	46	anti-parallel
Strand 3	M	58	63	anti-parallel
Strand 4	M	68	71	anti-parallel
Strand 5	M	99	111	anti-parallel
Strand 6	M	23	28	parallel
Strand 7	N	93	94	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	66	67	first strand
Strand 2	N	80	83	anti-parallel
Strand 3	N	116	119	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 7OBA

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OBA