Analysis of interatomic Contacts of Structural Units in PDB entry:
7OCK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OCK entry

There are 12 chains in PDB entry 7OCK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ALA 1	HIS 384
C	ALA 1	HIS 384
D	ALA 1	LYS 383
E	ALA 1	LYS 383
F	ALA 1	HIS 384
G	ALA 1	LYS 383
H	ALA 1	LYS 383
I	ALA 1	LYS 383
L	ILE 2	HIS 153
A	PHE 3	HIS 153
K	ILE 2	HIS 153
J	ILE 2	HIS 153

There are123 helices in PDB entry 7OCK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	14	34	Right-handed alpha
Helix 2	AA2	B	63	76	Right-handed alpha
Helix 3	AA3	B	135	155	Right-handed alpha
Helix 4	AA4	B	194	206	Right-handed alpha
Helix 5	AA5	B	207	211	Right-handed 310
Helix 6	AA6	B	233	238	Right-handed 310
Helix 7	AA7	B	245	251	Right-handed alpha
Helix 8	AA8	B	269	288	Right-handed alpha
Helix 9	AA9	B	321	333	Right-handed alpha
Helix 10	AB1	B	336	345	Right-handed alpha
Helix 11	AB2	B	352	356	Right-handed 310
Helix 12	AB3	B	365	369	Right-handed 310
Helix 13	AB4	B	372	380	Right-handed alpha
Helix 14	AB5	C	14	34	Right-handed alpha
Helix 15	AB6	C	63	76	Right-handed alpha
Helix 16	AB7	C	100	106	Right-handed alpha
Helix 17	AB8	C	135	155	Right-handed alpha
Helix 18	AB9	C	195	206	Right-handed alpha
Helix 19	AC1	C	206	211	Right-handed alpha
Helix 20	AC2	C	212	216	Right-handed 310
Helix 21	AC3	C	245	251	Right-handed alpha
Helix 22	AC4	C	269	289	Right-handed alpha
Helix 23	AC5	C	321	333	Right-handed alpha
Helix 24	AC6	C	336	345	Right-handed alpha
Helix 25	AC7	C	352	356	Right-handed 310
Helix 26	AC8	C	365	369	Right-handed 310
Helix 27	AC9	C	371	380	Right-handed alpha
Helix 28	AD1	D	14	34	Right-handed alpha
Helix 29	AD2	D	63	76	Right-handed alpha
Helix 30	AD3	D	100	104	Right-handed 310
Helix 31	AD4	D	135	154	Right-handed alpha
Helix 32	AD5	D	194	206	Right-handed alpha
Helix 33	AD6	D	206	211	Right-handed alpha
Helix 34	AD7	D	233	238	Right-handed alpha
Helix 35	AD8	D	245	251	Right-handed alpha
Helix 36	AD9	D	269	288	Right-handed alpha
Helix 37	AE1	D	321	333	Right-handed alpha
Helix 38	AE2	D	336	345	Right-handed alpha
Helix 39	AE3	D	350	355	Right-handed alpha
Helix 40	AE4	D	365	369	Right-handed 310
Helix 41	AE5	D	370	371	Right-handed 310
Helix 42	AE6	D	372	380	Right-handed alpha
Helix 43	AE7	E	14	34	Right-handed alpha
Helix 44	AE8	E	63	76	Right-handed alpha
Helix 45	AE9	E	79	83	Right-handed 310
Helix 46	AF1	E	135	155	Right-handed alpha
Helix 47	AF2	E	194	206	Right-handed alpha
Helix 48	AF3	E	206	211	Right-handed alpha
Helix 49	AF4	E	233	237	Right-handed 310
Helix 50	AF5	E	245	250	Right-handed alpha
Helix 51	AF6	E	269	288	Right-handed alpha
Helix 52	AF7	E	321	333	Right-handed alpha
Helix 53	AF8	E	336	345	Right-handed alpha
Helix 54	AF9	E	350	355	Right-handed alpha
Helix 55	AG1	E	365	369	Right-handed 310
Helix 56	AG2	E	370	380	Right-handed alpha
Helix 57	AG3	F	14	34	Right-handed alpha
Helix 58	AG4	F	63	76	Right-handed alpha
Helix 59	AG5	F	80	83	Right-handed 310
Helix 60	AG6	F	100	105	Right-handed alpha
Helix 61	AG7	F	110	114	Right-handed 310
Helix 62	AG8	F	135	155	Right-handed alpha
Helix 63	AG9	F	194	206	Right-handed alpha
Helix 64	AH1	F	206	211	Right-handed alpha
Helix 65	AH2	F	245	250	Right-handed alpha
Helix 66	AH3	F	269	289	Right-handed alpha
Helix 67	AH4	F	321	333	Right-handed alpha
Helix 68	AH5	F	336	345	Right-handed alpha
Helix 69	AH6	F	350	355	Right-handed alpha
Helix 70	AH7	F	365	369	Right-handed 310
Helix 71	AH8	F	370	371	Right-handed 310
Helix 72	AH9	F	372	380	Right-handed alpha
Helix 73	AI1	G	14	34	Right-handed alpha
Helix 74	AI2	G	63	76	Right-handed alpha
Helix 75	AI3	G	80	83	Right-handed 310
Helix 76	AI4	G	99	108	Right-handed alpha
Helix 77	AI5	G	135	154	Right-handed alpha
Helix 78	AI6	G	194	206	Right-handed alpha
Helix 79	AI7	G	206	211	Right-handed alpha
Helix 80	AI8	G	233	238	Right-handed alpha
Helix 81	AI9	G	245	251	Right-handed alpha
Helix 82	AJ1	G	269	288	Right-handed alpha
Helix 83	AJ2	G	321	333	Right-handed alpha
Helix 84	AJ3	G	336	345	Right-handed alpha
Helix 85	AJ4	G	371	381	Right-handed alpha
Helix 86	AJ5	H	14	34	Right-handed alpha
Helix 87	AJ6	H	63	76	Right-handed alpha
Helix 88	AJ7	H	80	83	Right-handed 310
Helix 89	AJ8	H	100	105	Right-handed alpha
Helix 90	AJ9	H	135	154	Right-handed alpha
Helix 91	AK1	H	195	206	Right-handed alpha
Helix 92	AK2	H	206	211	Right-handed alpha
Helix 93	AK3	H	233	238	Right-handed alpha
Helix 94	AK4	H	245	250	Right-handed alpha
Helix 95	AK5	H	269	288	Right-handed alpha
Helix 96	AK6	H	321	333	Right-handed alpha
Helix 97	AK7	H	336	345	Right-handed alpha
Helix 98	AK8	H	350	356	Right-handed alpha
Helix 99	AK9	H	372	380	Right-handed alpha
Helix 100	AL1	I	14	34	Right-handed alpha
Helix 101	AL2	I	63	76	Right-handed alpha
Helix 102	AL3	I	99	106	Right-handed alpha
Helix 103	AL4	I	135	154	Right-handed alpha
Helix 104	AL5	I	194	206	Right-handed alpha
Helix 105	AL6	I	206	211	Right-handed alpha
Helix 106	AL7	I	245	250	Right-handed alpha
Helix 107	AL8	I	269	288	Right-handed alpha
Helix 108	AL9	I	321	333	Right-handed alpha
Helix 109	AM1	I	336	345	Right-handed alpha
Helix 110	AM2	I	350	355	Right-handed alpha
Helix 111	AM3	I	365	369	Right-handed 310
Helix 112	AM4	I	372	380	Right-handed alpha
Helix 113	AM5	L	23	41	Right-handed alpha
Helix 114	AM6	L	41	46	Right-handed alpha
Helix 115	AM7	L	79	92	Right-handed alpha
Helix 116	AM8	A	23	41	Right-handed alpha
Helix 117	AM9	A	41	46	Right-handed alpha
Helix 118	AN1	A	79	92	Right-handed alpha
Helix 119	AN2	K	24	41	Right-handed alpha
Helix 120	AN3	K	79	92	Right-handed alpha
Helix 121	AN4	J	23	41	Right-handed alpha
Helix 122	AN5	J	41	46	Right-handed alpha
Helix 123	AN6	J	79	92	Right-handed alpha

There are 44 sheets in PDB entry 7OCK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	10	first strand
Strand 2	B	160	173	anti-parallel
Strand 3	B	176	189	anti-parallel
Strand 4	B	221	224	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	45	first strand
Strand 2	B	49	57	anti-parallel
Strand 3	B	90	93	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	45	first strand
Strand 2	B	49	57	anti-parallel
Strand 3	B	96	98	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	79	first strand
Strand 2	B	84	85	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	127	first strand
Strand 2	B	293	300	anti-parallel
Strand 3	B	307	313	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	10	first strand
Strand 2	C	160	173	anti-parallel
Strand 3	C	176	189	anti-parallel
Strand 4	C	221	224	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	45	first strand
Strand 2	C	49	57	anti-parallel
Strand 3	C	90	93	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	45	first strand
Strand 2	C	49	57	anti-parallel
Strand 3	C	96	98	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	79	first strand
Strand 2	C	84	85	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	127	first strand
Strand 2	C	293	300	anti-parallel
Strand 3	C	309	313	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	10	first strand
Strand 2	D	160	173	anti-parallel
Strand 3	D	176	189	anti-parallel
Strand 4	D	221	224	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	45	first strand
Strand 2	D	49	57	anti-parallel
Strand 3	D	90	96	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	79	first strand
Strand 2	D	84	85	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	127	first strand
Strand 2	D	293	300	anti-parallel
Strand 3	D	309	313	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	10	first strand
Strand 2	E	160	173	anti-parallel
Strand 3	E	176	189	anti-parallel
Strand 4	E	221	224	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	98	first strand
Strand 2	E	49	57	parallel
Strand 3	E	38	45	anti-parallel
Strand 4	E	240	241	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	127	first strand
Strand 2	E	293	300	anti-parallel
Strand 3	E	309	313	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	10	first strand
Strand 2	F	160	173	anti-parallel
Strand 3	F	176	189	anti-parallel
Strand 4	F	221	224	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	90	94	first strand
Strand 2	F	49	57	parallel
Strand 3	F	38	45	anti-parallel
Strand 4	F	240	241	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	78	79	first strand
Strand 2	F	84	85	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	120	127	first strand
Strand 2	F	293	300	anti-parallel
Strand 3	F	309	313	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	2	10	first strand
Strand 2	G	160	173	anti-parallel
Strand 3	G	176	189	anti-parallel
Strand 4	G	221	224	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	93	first strand
Strand 2	G	49	57	parallel
Strand 3	G	96	98	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	93	first strand
Strand 2	G	49	57	parallel
Strand 3	G	38	45	anti-parallel
Strand 4	G	240	241	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	78	79	first strand
Strand 2	G	84	85	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	120	127	first strand
Strand 2	G	293	300	anti-parallel
Strand 3	G	309	313	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	10	first strand
Strand 2	H	160	173	anti-parallel
Strand 3	H	176	189	anti-parallel
Strand 4	H	221	224	parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	96	first strand
Strand 2	H	49	57	parallel
Strand 3	H	38	45	anti-parallel
Strand 4	H	240	241	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	78	79	first strand
Strand 2	H	84	85	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	120	126	first strand
Strand 2	H	294	300	anti-parallel
Strand 3	H	307	313	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	10	first strand
Strand 2	I	160	173	anti-parallel
Strand 3	I	176	189	anti-parallel
Strand 4	I	221	224	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	90	95	first strand
Strand 2	I	49	54	parallel
Strand 3	I	42	45	anti-parallel
Strand 4	I	240	241	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	78	79	first strand
Strand 2	I	84	85	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	120	127	first strand
Strand 2	I	293	300	anti-parallel
Strand 3	I	307	313	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	49	50	first strand
Strand 2	L	71	75	anti-parallel
Strand 3	L	12	16	anti-parallel
Strand 4	L	97	101	anti-parallel
Strand 5	L	109	110	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	66	69	first strand
Strand 2	L	54	57	anti-parallel
Strand 3	L	139	142	anti-parallel
Strand 4	L	145	146	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	50	first strand
Strand 2	A	71	75	anti-parallel
Strand 3	A	12	16	anti-parallel
Strand 4	A	97	101	anti-parallel
Strand 5	A	109	110	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	69	first strand
Strand 2	A	54	57	anti-parallel
Strand 3	A	139	142	anti-parallel
Strand 4	A	145	147	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	47	50	first strand
Strand 2	K	66	75	anti-parallel
Strand 3	K	12	17	anti-parallel
Strand 4	K	97	101	anti-parallel
Strand 5	K	109	110	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	47	50	first strand
Strand 2	K	66	75	anti-parallel
Strand 3	K	54	57	anti-parallel
Strand 4	K	140	141	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	126	129	first strand
Strand 2	K	148	150	anti-parallel

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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	47	48	first strand
Strand 2	J	71	75	anti-parallel
Strand 3	J	12	16	anti-parallel
Strand 4	J	96	101	anti-parallel
Strand 5	J	109	111	anti-parallel
Strand 6	J	119	120	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	66	69	first strand
Strand 2	J	54	57	anti-parallel
Strand 3	J	139	142	anti-parallel
Strand 4	J	145	146	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	126	129	first strand
Strand 2	J	148	150	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OCK

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OCK