Analysis of interatomic Contacts of Structural Units in PDB entry:
7OD7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OD7 entry

There are 5 chains in PDB entry 7OD7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1ARG 150
A
 MET 1LEU 143
C
 MET 1PRO 144
D
 MET 1PRO 144
E
 UNK 5UNK 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7OD7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
12 17Right-handed alpha
Helix 2
AA2
B
26 43Right-handed alpha
Helix 3
AA3
B
49 76Right-handed alpha
Helix 4
AA4
B
78 110Right-handed alpha
Helix 5
AA5
B
111 128Right-handed alpha
Helix 6
AA6
A
12 17Right-handed alpha
Helix 7
AA7
A
26 43Right-handed alpha
Helix 8
AA8
A
49 76Right-handed alpha
Helix 9
AA9
A
78 111Right-handed alpha
Helix 10
AB1
A
111 128Right-handed alpha
Helix 11
AB2
A
129 133Right-handed 310
Helix 12
AB3
C
12 17Right-handed alpha
Helix 13
AB4
C
26 38Right-handed alpha
Helix 14
AB5
C
38 43Right-handed alpha
Helix 15
AB6
C
49 76Right-handed alpha
Helix 16
AB7
C
78 110Right-handed alpha
Helix 17
AB8
C
111 128Right-handed alpha
Helix 18
AB9
C
129 133Right-handed 310
Helix 19
AC1
D
20 24Right-handed 310
Helix 20
AC2
D
26 38Right-handed alpha
Helix 21
AC3
D
38 43Right-handed alpha
Helix 22
AC4
D
49 76Right-handed alpha
Helix 23
AC5
D
78 110Right-handed alpha
Helix 24
AC6
D
111 128Right-handed alpha
Helix 25
AC7
D
129 133Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7OD7.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 149first strand
Strand 2
C
139 140parallel
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