Analysis of interatomic Contacts of Structural Units in PDB entry:
7OE2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OE2 entry

There are 10 chains in PDB entry 7OE2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 266
B	MET 1	ALA 266
C	MET 1	ALA 266
D	MET 1	ALA 266
E	MET 1	ALA 266
1	GLY 917	ARG 925
2	GLY 917	ARG 925
3	GLY 917	ARG 925
4	GLY 917	ARG 925
5	GLY 917	ARG 925

There are 65 helices in PDB entry 7OE2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	9	Right-handed 310
Helix 2	AA2	A	12	31	Right-handed alpha
Helix 3	AA3	A	32	37	Right-handed alpha
Helix 4	AA4	A	86	92	Right-handed alpha
Helix 5	AA5	A	93	95	Right-handed 310
Helix 6	AA6	A	101	122	Right-handed alpha
Helix 7	AA7	A	123	127	Right-handed 310
Helix 8	AA8	A	130	135	Right-handed alpha
Helix 9	AA9	A	144	146	Right-handed 310
Helix 10	AB1	A	147	162	Right-handed alpha
Helix 11	AB2	A	173	183	Right-handed alpha
Helix 12	AB3	A	190	198	Right-handed alpha
Helix 13	AB4	A	256	258	Right-handed 310
Helix 14	AB5	B	5	9	Right-handed 310
Helix 15	AB6	B	12	31	Right-handed alpha
Helix 16	AB7	B	32	37	Right-handed alpha
Helix 17	AB8	B	86	92	Right-handed alpha
Helix 18	AB9	B	93	95	Right-handed 310
Helix 19	AC1	B	101	122	Right-handed alpha
Helix 20	AC2	B	123	127	Right-handed 310
Helix 21	AC3	B	130	135	Right-handed alpha
Helix 22	AC4	B	144	146	Right-handed 310
Helix 23	AC5	B	147	162	Right-handed alpha
Helix 24	AC6	B	173	183	Right-handed alpha
Helix 25	AC7	B	190	198	Right-handed alpha
Helix 26	AC8	B	256	258	Right-handed 310
Helix 27	AC9	C	5	9	Right-handed 310
Helix 28	AD1	C	12	31	Right-handed alpha
Helix 29	AD2	C	32	37	Right-handed alpha
Helix 30	AD3	C	86	92	Right-handed alpha
Helix 31	AD4	C	93	95	Right-handed 310
Helix 32	AD5	C	101	122	Right-handed alpha
Helix 33	AD6	C	123	127	Right-handed 310
Helix 34	AD7	C	130	135	Right-handed alpha
Helix 35	AD8	C	144	146	Right-handed 310
Helix 36	AD9	C	147	162	Right-handed alpha
Helix 37	AE1	C	173	183	Right-handed alpha
Helix 38	AE2	C	190	198	Right-handed alpha
Helix 39	AE3	C	256	258	Right-handed 310
Helix 40	AE4	D	5	9	Right-handed 310
Helix 41	AE5	D	12	31	Right-handed alpha
Helix 42	AE6	D	32	37	Right-handed alpha
Helix 43	AE7	D	86	92	Right-handed alpha
Helix 44	AE8	D	93	95	Right-handed 310
Helix 45	AE9	D	101	122	Right-handed alpha
Helix 46	AF1	D	123	127	Right-handed 310
Helix 47	AF2	D	130	135	Right-handed alpha
Helix 48	AF3	D	144	146	Right-handed 310
Helix 49	AF4	D	147	162	Right-handed alpha
Helix 50	AF5	D	173	183	Right-handed alpha
Helix 51	AF6	D	190	198	Right-handed alpha
Helix 52	AF7	D	256	258	Right-handed 310
Helix 53	AF8	E	5	9	Right-handed 310
Helix 54	AF9	E	12	31	Right-handed alpha
Helix 55	AG1	E	32	37	Right-handed alpha
Helix 56	AG2	E	86	92	Right-handed alpha
Helix 57	AG3	E	93	95	Right-handed 310
Helix 58	AG4	E	101	122	Right-handed alpha
Helix 59	AG5	E	123	127	Right-handed 310
Helix 60	AG6	E	130	135	Right-handed alpha
Helix 61	AG7	E	144	146	Right-handed 310
Helix 62	AG8	E	147	162	Right-handed alpha
Helix 63	AG9	E	173	183	Right-handed alpha
Helix 64	AH1	E	190	198	Right-handed alpha
Helix 65	AH2	E	256	258	Right-handed 310

There are 25 sheets in PDB entry 7OE2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	40	first strand
Strand 2	A	222	226	parallel
Strand 3	A	241	254	anti-parallel
Strand 4	A	76	85	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	40	first strand
Strand 2	A	222	226	parallel
Strand 3	A	241	254	anti-parallel
Strand 4	A	231	237	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	57	first strand
Strand 2	A	68	74	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	141	first strand
Strand 2	A	260	264	parallel
Strand 3	A	212	216	anti-parallel
Strand 4	A	168	172	anti-parallel
Strand 5	A	204	205	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	185	first strand
Strand 2	A	188	189	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	40	first strand
Strand 2	B	222	226	parallel
Strand 3	B	241	254	anti-parallel
Strand 4	B	76	85	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	40	first strand
Strand 2	B	222	226	parallel
Strand 3	B	241	254	anti-parallel
Strand 4	B	231	237	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	57	first strand
Strand 2	B	68	74	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	141	first strand
Strand 2	B	260	264	parallel
Strand 3	B	212	216	anti-parallel
Strand 4	B	168	172	anti-parallel
Strand 5	B	204	205	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	184	185	first strand
Strand 2	B	188	189	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	40	first strand
Strand 2	C	222	226	parallel
Strand 3	C	241	254	anti-parallel
Strand 4	C	76	85	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	40	first strand
Strand 2	C	222	226	parallel
Strand 3	C	241	254	anti-parallel
Strand 4	C	231	237	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	57	first strand
Strand 2	C	68	74	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	141	first strand
Strand 2	C	260	264	parallel
Strand 3	C	212	216	anti-parallel
Strand 4	C	168	172	anti-parallel
Strand 5	C	204	205	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	185	first strand
Strand 2	C	188	189	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	40	first strand
Strand 2	D	222	226	parallel
Strand 3	D	241	254	anti-parallel
Strand 4	D	76	85	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	40	first strand
Strand 2	D	222	226	parallel
Strand 3	D	241	254	anti-parallel
Strand 4	D	231	237	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	49	57	first strand
Strand 2	D	68	74	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	140	141	first strand
Strand 2	D	260	264	parallel
Strand 3	D	212	216	anti-parallel
Strand 4	D	168	172	anti-parallel
Strand 5	D	204	205	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	184	185	first strand
Strand 2	D	188	189	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	40	first strand
Strand 2	E	222	226	parallel
Strand 3	E	241	254	anti-parallel
Strand 4	E	76	85	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	40	first strand
Strand 2	E	222	226	parallel
Strand 3	E	241	254	anti-parallel
Strand 4	E	231	237	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	49	57	first strand
Strand 2	E	68	74	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	140	141	first strand
Strand 2	E	260	264	parallel
Strand 3	E	212	216	anti-parallel
Strand 4	E	168	172	anti-parallel
Strand 5	E	204	205	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	184	185	first strand
Strand 2	E	188	189	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OE2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OE2