Analysis of interatomic Contacts of Structural Units in PDB entry:
7OEU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OEU entry

There are 10 chains in PDB entry 7OEU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ALA 266
1	GLY 117	ARG 125
2	GLY 117	ARG 125
3	GLY 117	ARG 125
4	GLY 117	ARG 125
5	GLY 117	ARG 125
B	MET 1	ALA 266
C	MET 1	ALA 266
D	MET 1	ALA 266
E	MET 1	ALA 266

There are 55 helices in PDB entry 7OEU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	9	Right-handed 310
Helix 2	AA2	A	12	31	Right-handed alpha
Helix 3	AA3	A	32	36	Right-handed 310
Helix 4	AA4	A	86	94	Right-handed alpha
Helix 5	AA5	A	101	122	Right-handed alpha
Helix 6	AA6	A	123	127	Right-handed 310
Helix 7	AA7	A	130	135	Right-handed alpha
Helix 8	AA8	A	144	146	Right-handed 310
Helix 9	AA9	A	147	162	Right-handed alpha
Helix 10	AB1	A	173	182	Right-handed alpha
Helix 11	AB2	A	190	198	Right-handed alpha
Helix 12	AB3	B	5	9	Right-handed 310
Helix 13	AB4	B	12	31	Right-handed alpha
Helix 14	AB5	B	32	36	Right-handed 310
Helix 15	AB6	B	86	94	Right-handed alpha
Helix 16	AB7	B	101	122	Right-handed alpha
Helix 17	AB8	B	123	127	Right-handed 310
Helix 18	AB9	B	130	135	Right-handed alpha
Helix 19	AC1	B	144	146	Right-handed 310
Helix 20	AC2	B	147	162	Right-handed alpha
Helix 21	AC3	B	173	182	Right-handed alpha
Helix 22	AC4	B	190	198	Right-handed alpha
Helix 23	AC5	C	5	9	Right-handed 310
Helix 24	AC6	C	12	31	Right-handed alpha
Helix 25	AC7	C	32	36	Right-handed 310
Helix 26	AC8	C	86	94	Right-handed alpha
Helix 27	AC9	C	101	122	Right-handed alpha
Helix 28	AD1	C	123	127	Right-handed 310
Helix 29	AD2	C	130	135	Right-handed alpha
Helix 30	AD3	C	144	146	Right-handed 310
Helix 31	AD4	C	147	162	Right-handed alpha
Helix 32	AD5	C	173	182	Right-handed alpha
Helix 33	AD6	C	190	198	Right-handed alpha
Helix 34	AD7	D	5	9	Right-handed 310
Helix 35	AD8	D	12	31	Right-handed alpha
Helix 36	AD9	D	32	36	Right-handed 310
Helix 37	AE1	D	86	94	Right-handed alpha
Helix 38	AE2	D	101	122	Right-handed alpha
Helix 39	AE3	D	123	127	Right-handed 310
Helix 40	AE4	D	130	135	Right-handed alpha
Helix 41	AE5	D	144	146	Right-handed 310
Helix 42	AE6	D	147	162	Right-handed alpha
Helix 43	AE7	D	173	182	Right-handed alpha
Helix 44	AE8	D	190	198	Right-handed alpha
Helix 45	AE9	E	5	9	Right-handed 310
Helix 46	AF1	E	12	31	Right-handed alpha
Helix 47	AF2	E	32	36	Right-handed 310
Helix 48	AF3	E	86	94	Right-handed alpha
Helix 49	AF4	E	101	122	Right-handed alpha
Helix 50	AF5	E	123	127	Right-handed 310
Helix 51	AF6	E	130	135	Right-handed alpha
Helix 52	AF7	E	144	146	Right-handed 310
Helix 53	AF8	E	147	162	Right-handed alpha
Helix 54	AF9	E	173	182	Right-handed alpha
Helix 55	AG1	E	190	198	Right-handed alpha

There are 20 sheets in PDB entry 7OEU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	40	first strand
Strand 2	A	222	226	parallel
Strand 3	A	241	254	anti-parallel
Strand 4	A	76	85	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	40	first strand
Strand 2	A	222	226	parallel
Strand 3	A	241	254	anti-parallel
Strand 4	A	231	237	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	57	first strand
Strand 2	A	68	74	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	205	first strand
Strand 2	A	168	172	parallel
Strand 3	A	212	216	anti-parallel
Strand 4	A	260	263	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	40	first strand
Strand 2	B	222	226	parallel
Strand 3	B	241	254	anti-parallel
Strand 4	B	76	85	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	40	first strand
Strand 2	B	222	226	parallel
Strand 3	B	241	254	anti-parallel
Strand 4	B	231	237	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	57	first strand
Strand 2	B	68	74	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	168	172	parallel
Strand 3	B	212	216	anti-parallel
Strand 4	B	260	263	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	40	first strand
Strand 2	C	222	226	parallel
Strand 3	C	241	254	anti-parallel
Strand 4	C	76	85	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	40	first strand
Strand 2	C	222	226	parallel
Strand 3	C	241	254	anti-parallel
Strand 4	C	231	237	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	57	first strand
Strand 2	C	68	74	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	205	first strand
Strand 2	C	168	172	parallel
Strand 3	C	212	216	anti-parallel
Strand 4	C	260	263	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	40	first strand
Strand 2	D	222	226	parallel
Strand 3	D	241	254	anti-parallel
Strand 4	D	76	85	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	40	first strand
Strand 2	D	222	226	parallel
Strand 3	D	241	254	anti-parallel
Strand 4	D	231	237	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	49	57	first strand
Strand 2	D	68	74	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	205	first strand
Strand 2	D	168	172	parallel
Strand 3	D	212	216	anti-parallel
Strand 4	D	260	263	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	40	first strand
Strand 2	E	222	226	parallel
Strand 3	E	241	254	anti-parallel
Strand 4	E	76	85	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	40	first strand
Strand 2	E	222	226	parallel
Strand 3	E	241	254	anti-parallel
Strand 4	E	231	237	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	49	57	first strand
Strand 2	E	68	74	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	203	205	first strand
Strand 2	E	168	172	parallel
Strand 3	E	212	216	anti-parallel
Strand 4	E	260	263	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OEU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OEU