Analysis of interatomic Contacts of Structural Units in PDB entry:
7OFL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OFL entry

There are 2 chains in PDB entry 7OFL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 14ALA 348
B
 ALA 15ALA 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 31 helices in PDB entry 7OFL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 53Right-handed alpha
Helix 2
AA2
A
58 65Right-handed alpha
Helix 3
AA3
A
67 76Right-handed alpha
Helix 4
AA4
A
80 102Right-handed alpha
Helix 5
AA5
A
105 122Right-handed alpha
Helix 6
AA6
A
130 145Right-handed alpha
Helix 7
AA7
A
148 176Right-handed alpha
Helix 8
AA8
A
180 192Right-handed alpha
Helix 9
AA9
A
193 205Right-handed alpha
Helix 10
AB1
A
210 215Right-handed alpha
Helix 11
AB2
A
216 244Right-handed alpha
Helix 12
AB3
A
250 260Right-handed alpha
Helix 13
AB4
A
262 286Right-handed alpha
Helix 14
AB5
A
292 320Right-handed alpha
Helix 15
AB6
A
324 326Right-handed 310
Helix 16
AB7
A
327 335Right-handed alpha
Helix 17
AB8
B
37 53Right-handed alpha
Helix 18
AB9
B
58 65Right-handed alpha
Helix 19
AC1
B
67 76Right-handed alpha
Helix 20
AC2
B
80 102Right-handed alpha
Helix 21
AC3
B
105 122Right-handed alpha
Helix 22
AC4
B
130 144Right-handed alpha
Helix 23
AC5
B
148 175Right-handed alpha
Helix 24
AC6
B
180 192Right-handed alpha
Helix 25
AC7
B
193 205Right-handed alpha
Helix 26
AC8
B
210 215Right-handed alpha
Helix 27
AC9
B
216 244Right-handed alpha
Helix 28
AD1
B
250 260Right-handed alpha
Helix 29
AD2
B
262 287Right-handed alpha
Helix 30
AD3
B
292 320Right-handed alpha
Helix 31
AD4
B
327 335Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7OFL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
336 338anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 20first strand
Strand 2
B
336 338anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il