Analysis of interatomic Contacts of Structural Units in PDB entry:
7OFY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OFY entry

There are 2 chains in PDB entry 7OFY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 389
B
 ASP 2LEU 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7OFY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 29Right-handed alpha
Helix 2
AA2
A
42 56Right-handed alpha
Helix 3
AA3
A
70 77Right-handed alpha
Helix 4
AA4
A
92 99Right-handed alpha
Helix 5
AA5
A
121 128Right-handed alpha
Helix 6
AA6
A
134 150Right-handed alpha
Helix 7
AA7
A
164 178Right-handed alpha
Helix 8
AA8
A
191 208Right-handed alpha
Helix 9
AA9
A
214 218Right-handed 310
Helix 10
AB1
A
219 229Right-handed alpha
Helix 11
AB2
A
240 246Right-handed alpha
Helix 12
AB3
A
286 298Right-handed alpha
Helix 13
AB4
A
299 311Right-handed alpha
Helix 14
AB5
A
316 321Right-handed 310
Helix 15
AB6
A
322 329Right-handed alpha
Helix 16
AB7
A
330 334Right-handed 310
Helix 17
AB8
A
335 342Right-handed alpha
Helix 18
AB9
A
350 367Right-handed alpha
Helix 19
AC1
A
371 384Right-handed alpha
Helix 20
AC2
B
14 29Right-handed alpha
Helix 21
AC3
B
42 56Right-handed alpha
Helix 22
AC4
B
70 78Right-handed alpha
Helix 23
AC5
B
92 99Right-handed alpha
Helix 24
AC6
B
121 128Right-handed alpha
Helix 25
AC7
B
134 150Right-handed alpha
Helix 26
AC8
B
164 178Right-handed alpha
Helix 27
AC9
B
191 208Right-handed alpha
Helix 28
AD1
B
214 218Right-handed 310
Helix 29
AD2
B
219 229Right-handed alpha
Helix 30
AD3
B
240 246Right-handed alpha
Helix 31
AD4
B
286 298Right-handed alpha
Helix 32
AD5
B
299 311Right-handed alpha
Helix 33
AD6
B
316 321Right-handed 310
Helix 34
AD7
B
322 329Right-handed alpha
Helix 35
AD8
B
330 334Right-handed 310
Helix 36
AD9
B
335 342Right-handed alpha
Helix 37
AE1
B
350 367Right-handed alpha
Helix 38
AE2
B
371 384Right-handed alpha
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There are 7 sheets in PDB entry 7OFY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 39first strand
Strand 2
A
3 10parallel
Strand 3
A
63 67parallel
Strand 4
A
273 280anti-parallel
Strand 5
A
108 114anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
104 105anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 158first strand
Strand 2
A
232 237parallel
Strand 3
A
116 120anti-parallel
Strand 4
A
256 259anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 184first strand
Strand 2
A
187 188anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 39first strand
Strand 2
B
3 10parallel
Strand 3
B
63 67parallel
Strand 4
B
273 280anti-parallel
Strand 5
B
108 114anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
104 105anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 158first strand
Strand 2
B
232 237parallel
Strand 3
B
116 120anti-parallel
Strand 4
B
256 259anti-parallel
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