Analysis of interatomic Contacts of Structural Units in PDB entry:
7OFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OFZ entry

There are 2 chains in PDB entry 7OFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 35ILE 560
C
 C 1 G 19
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7OFZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 66Right-handed alpha
Helix 2
AA2
A
119 132Right-handed alpha
Helix 3
AA3
A
164 170Right-handed alpha
Helix 4
AA4
A
171 175Right-handed 310
Helix 5
AA5
A
197 202Right-handed alpha
Helix 6
AA6
A
211 220Right-handed alpha
Helix 7
AA7
A
221 222Right-handed 310
Helix 8
AA8
A
223 229Right-handed 310
Helix 9
AA9
A
276 283Right-handed alpha
Helix 10
AB1
A
293 298Right-handed alpha
Helix 11
AB2
A
331 341Right-handed alpha
Helix 12
AB3
A
343 353Right-handed alpha
Helix 13
AB4
A
382 392Right-handed alpha
Helix 14
AB5
A
411 425Right-handed alpha
Helix 15
AB6
A
436 443Right-handed alpha
Helix 16
AB7
A
464 467Right-handed 310
Helix 17
AB8
A
468 474Right-handed alpha
Helix 18
AB9
A
489 499Right-handed alpha
Helix 19
AC1
A
504 523Right-handed alpha
Helix 20
AC2
A
553 557Right-handed 310
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There are 5 sheets in PDB entry 7OFZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 243first strand
Strand 2
A
247 252anti-parallel
Strand 3
A
265 269anti-parallel
Strand 4
A
36 39parallel
Strand 5
A
288 290parallel
Strand 6
A
533 538anti-parallel
Strand 7
A
307 312anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
80 81anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 89first strand
Strand 2
A
95 100anti-parallel
Strand 3
A
186 190anti-parallel
Strand 4
A
178 183anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 358first strand
Strand 2
A
525 531anti-parallel
Strand 3
A
315 322anti-parallel
Strand 4
A
453 460anti-parallel
Strand 5
A
395 402parallel
Strand 6
A
428 435parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 542first strand
Strand 2
A
558 559anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il