Analysis of interatomic Contacts of Structural Units in PDB entry:
7OG0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OG0 entry

There are 4 chains in PDB entry 7OG0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 35	ILE 560
B	ASN 34	ILE 560
D	C 2	G 18
E	C 2	G 18

There are 42 helices in PDB entry 7OG0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	61	66	Right-handed alpha
Helix 2	AA2	A	119	132	Right-handed alpha
Helix 3	AA3	A	164	171	Right-handed alpha
Helix 4	AA4	A	172	174	Right-handed 310
Helix 5	AA5	A	197	202	Right-handed alpha
Helix 6	AA6	A	211	221	Right-handed alpha
Helix 7	AA7	A	223	228	Right-handed 310
Helix 8	AA8	A	275	283	Right-handed alpha
Helix 9	AA9	A	296	300	Right-handed 310
Helix 10	AB1	A	326	330	Right-handed 310
Helix 11	AB2	A	331	342	Right-handed alpha
Helix 12	AB3	A	343	353	Right-handed alpha
Helix 13	AB4	A	382	391	Right-handed alpha
Helix 14	AB5	A	392	394	Right-handed 310
Helix 15	AB6	A	411	426	Right-handed alpha
Helix 16	AB7	A	436	446	Right-handed alpha
Helix 17	AB8	A	468	474	Right-handed alpha
Helix 18	AB9	A	489	499	Right-handed alpha
Helix 19	AC1	A	504	523	Right-handed alpha
Helix 20	AC2	A	553	557	Right-handed 310
Helix 21	AC3	B	61	66	Right-handed alpha
Helix 22	AC4	B	119	132	Right-handed alpha
Helix 23	AC5	B	165	171	Right-handed alpha
Helix 24	AC6	B	172	174	Right-handed 310
Helix 25	AC7	B	197	202	Right-handed alpha
Helix 26	AC8	B	211	221	Right-handed alpha
Helix 27	AC9	B	222	224	Right-handed 310
Helix 28	AD1	B	225	230	Right-handed alpha
Helix 29	AD2	B	273	283	Right-handed alpha
Helix 30	AD3	B	294	300	Right-handed 310
Helix 31	AD4	B	326	330	Right-handed 310
Helix 32	AD5	B	331	342	Right-handed alpha
Helix 33	AD6	B	343	352	Right-handed alpha
Helix 34	AD7	B	382	391	Right-handed alpha
Helix 35	AD8	B	392	394	Right-handed 310
Helix 36	AD9	B	411	426	Right-handed alpha
Helix 37	AE1	B	436	446	Right-handed alpha
Helix 38	AE2	B	464	474	Right-handed alpha
Helix 39	AE3	B	476	480	Right-handed 310
Helix 40	AE4	B	489	500	Right-handed alpha
Helix 41	AE5	B	504	523	Right-handed alpha
Helix 42	AE6	B	553	557	Right-handed 310

There are 10 sheets in PDB entry 7OG0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	243	first strand
Strand 2	A	247	252	anti-parallel
Strand 3	A	265	269	anti-parallel
Strand 4	A	36	39	parallel
Strand 5	A	288	290	parallel
Strand 6	A	533	538	anti-parallel
Strand 7	A	307	312	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	72	first strand
Strand 2	A	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	89	first strand
Strand 2	A	95	100	anti-parallel
Strand 3	A	186	191	anti-parallel
Strand 4	A	176	183	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	525	531	anti-parallel
Strand 3	A	315	322	anti-parallel
Strand 4	A	453	460	anti-parallel
Strand 5	A	396	402	parallel
Strand 6	A	429	435	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	541	542	first strand
Strand 2	A	558	559	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	243	first strand
Strand 2	B	247	252	anti-parallel
Strand 3	B	265	269	anti-parallel
Strand 4	B	35	39	parallel
Strand 5	B	288	290	parallel
Strand 6	B	533	538	anti-parallel
Strand 7	B	307	312	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	72	first strand
Strand 2	B	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	89	first strand
Strand 2	B	95	100	anti-parallel
Strand 3	B	186	191	anti-parallel
Strand 4	B	176	183	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	358	first strand
Strand 2	B	525	531	anti-parallel
Strand 3	B	316	322	anti-parallel
Strand 4	B	453	459	anti-parallel
Strand 5	B	396	402	parallel
Strand 6	B	429	435	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	541	542	first strand
Strand 2	B	558	559	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OG0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OG0