Analysis of interatomic Contacts of Structural Units in PDB entry:
7OGL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OGL entry

There are 3 chains in PDB entry 7OGL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 689
B	MET 1	GLN 695
C	MET 1	GLN 695

There are 63 helices in PDB entry 7OGL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	67	71	Right-handed 310
Helix 2	AA2	A	85	100	Right-handed alpha
Helix 3	AA3	A	101	103	Right-handed 310
Helix 4	AA4	A	126	141	Right-handed alpha
Helix 5	AA5	A	168	173	Right-handed alpha
Helix 6	AA6	A	197	212	Right-handed alpha
Helix 7	AA7	A	212	227	Right-handed alpha
Helix 8	AA8	A	239	258	Right-handed alpha
Helix 9	AA9	A	262	285	Right-handed alpha
Helix 10	AB1	A	292	312	Right-handed alpha
Helix 11	AB2	A	358	362	Right-handed 310
Helix 12	AB3	A	383	388	Right-handed 310
Helix 13	AB4	A	396	413	Right-handed alpha
Helix 14	AB5	A	438	454	Right-handed alpha
Helix 15	AB6	A	485	489	Right-handed 310
Helix 16	AB7	A	515	541	Right-handed alpha
Helix 17	AB8	A	565	570	Right-handed alpha
Helix 18	AB9	A	573	583	Right-handed alpha
Helix 19	AC1	A	601	618	Right-handed alpha
Helix 20	AC2	A	652	654	Right-handed 310
Helix 21	AC3	A	681	683	Right-handed 310
Helix 22	AC4	B	67	71	Right-handed 310
Helix 23	AC5	B	85	100	Right-handed alpha
Helix 24	AC6	B	101	103	Right-handed 310
Helix 25	AC7	B	126	141	Right-handed alpha
Helix 26	AC8	B	168	173	Right-handed alpha
Helix 27	AC9	B	197	212	Right-handed alpha
Helix 28	AD1	B	212	227	Right-handed alpha
Helix 29	AD2	B	239	258	Right-handed alpha
Helix 30	AD3	B	262	285	Right-handed alpha
Helix 31	AD4	B	292	312	Right-handed alpha
Helix 32	AD5	B	358	362	Right-handed 310
Helix 33	AD6	B	383	388	Right-handed 310
Helix 34	AD7	B	397	413	Right-handed alpha
Helix 35	AD8	B	438	454	Right-handed alpha
Helix 36	AD9	B	515	541	Right-handed alpha
Helix 37	AE1	B	561	564	Right-handed 310
Helix 38	AE2	B	565	570	Right-handed alpha
Helix 39	AE3	B	573	584	Right-handed alpha
Helix 40	AE4	B	601	613	Right-handed alpha
Helix 41	AE5	C	67	71	Right-handed 310
Helix 42	AE6	C	85	100	Right-handed alpha
Helix 43	AE7	C	101	103	Right-handed 310
Helix 44	AE8	C	126	141	Right-handed alpha
Helix 45	AE9	C	168	173	Right-handed alpha
Helix 46	AF1	C	197	212	Right-handed alpha
Helix 47	AF2	C	212	227	Right-handed alpha
Helix 48	AF3	C	239	258	Right-handed alpha
Helix 49	AF4	C	262	285	Right-handed alpha
Helix 50	AF5	C	292	312	Right-handed alpha
Helix 51	AF6	C	358	362	Right-handed 310
Helix 52	AF7	C	383	388	Right-handed 310
Helix 53	AF8	C	397	413	Right-handed alpha
Helix 54	AF9	C	438	454	Right-handed alpha
Helix 55	AG1	C	485	489	Right-handed 310
Helix 56	AG2	C	515	541	Right-handed alpha
Helix 57	AG3	C	561	564	Right-handed 310
Helix 58	AG4	C	565	570	Right-handed alpha
Helix 59	AG5	C	573	582	Right-handed alpha
Helix 60	AG6	C	601	616	Right-handed alpha
Helix 61	AG7	C	651	655	Right-handed alpha
Helix 62	AG8	C	661	665	Right-handed 310
Helix 63	AG9	C	681	683	Right-handed 310

There are 19 sheets in PDB entry 7OGL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	8	first strand
Strand 2	A	17	20	anti-parallel
Strand 3	A	29	35	anti-parallel
Strand 4	A	38	46	anti-parallel
Strand 5	A	111	119	anti-parallel
Strand 6	A	59	65	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	163	first strand
Strand 2	A	150	157	anti-parallel
Strand 3	A	175	181	anti-parallel
Strand 4	A	186	196	anti-parallel
Strand 5	A	501	509	anti-parallel
Strand 6	A	491	498	anti-parallel
Strand 7	A	462	471	anti-parallel
Strand 8	A	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	327	331	first strand
Strand 2	A	339	345	anti-parallel
Strand 3	A	348	357	anti-parallel
Strand 4	A	424	433	anti-parallel
Strand 5	A	376	381	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	365	first strand
Strand 2	A	372	374	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	625	633	first strand
Strand 2	A	636	640	anti-parallel
Strand 3	A	646	650	anti-parallel
Strand 4	A	685	688	parallel
Strand 5	A	671	679	anti-parallel
Strand 6	A	625	633	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	7	first strand
Strand 2	B	14	20	anti-parallel
Strand 3	B	10	11	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	7	first strand
Strand 2	B	14	20	anti-parallel
Strand 3	B	29	35	anti-parallel
Strand 4	B	38	46	anti-parallel
Strand 5	B	111	119	anti-parallel
Strand 6	B	59	65	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	163	first strand
Strand 2	B	150	157	anti-parallel
Strand 3	B	175	181	anti-parallel
Strand 4	B	186	196	anti-parallel
Strand 5	B	501	509	anti-parallel
Strand 6	B	491	498	anti-parallel
Strand 7	B	462	471	anti-parallel
Strand 8	B	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	327	331	first strand
Strand 2	B	339	345	anti-parallel
Strand 3	B	348	357	anti-parallel
Strand 4	B	424	433	anti-parallel
Strand 5	B	376	381	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	365	first strand
Strand 2	B	372	374	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	557	559	first strand
Strand 2	B	594	598	anti-parallel
Strand 3	B	586	591	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	625	632	first strand
Strand 2	B	636	642	anti-parallel
Strand 3	B	645	650	anti-parallel
Strand 4	B	686	688	parallel
Strand 5	B	671	678	anti-parallel
Strand 6	B	625	632	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	7	first strand
Strand 2	C	14	20	anti-parallel
Strand 3	C	10	11	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	7	first strand
Strand 2	C	14	20	anti-parallel
Strand 3	C	29	35	anti-parallel
Strand 4	C	38	46	anti-parallel
Strand 5	C	111	119	anti-parallel
Strand 6	C	59	65	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	163	first strand
Strand 2	C	150	157	anti-parallel
Strand 3	C	175	181	anti-parallel
Strand 4	C	186	196	anti-parallel
Strand 5	C	501	509	anti-parallel
Strand 6	C	491	498	anti-parallel
Strand 7	C	462	471	anti-parallel
Strand 8	C	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	327	331	first strand
Strand 2	C	339	345	anti-parallel
Strand 3	C	347	357	anti-parallel
Strand 4	C	424	435	anti-parallel
Strand 5	C	376	381	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	363	365	first strand
Strand 2	C	372	374	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	554	559	first strand
Strand 2	C	594	599	anti-parallel
Strand 3	C	586	588	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	624	633	first strand
Strand 2	C	636	642	anti-parallel
Strand 3	C	645	650	anti-parallel
Strand 4	C	685	688	parallel
Strand 5	C	671	679	anti-parallel
Strand 6	C	624	633	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OGL

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OGL