Analysis of interatomic Contacts of Structural Units in PDB entry:
7OHG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OHG entry

There is 1 chain in PDB entry 7OHG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 5ARG 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 7OHG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 16Right-handed alpha
Helix 2
AA2
A
20 38Right-handed alpha
Helix 3
AA3
A
50 63Right-handed alpha
Helix 4
AA4
A
66 76Right-handed alpha
Helix 5
AA5
A
77 82Right-handed alpha
Helix 6
AA6
A
85 114Right-handed alpha
Helix 7
AA7
A
121 134Right-handed alpha
Helix 8
AA8
A
137 153Right-handed alpha
Helix 9
AA9
A
154 157Right-handed 310
Helix 10
AB1
A
158 172Right-handed alpha
Helix 11
AB2
A
172 181Right-handed alpha
Helix 12
AB3
A
182 198Right-handed alpha
Helix 13
AB4
A
198 233Right-handed alpha
Helix 14
AB5
A
234 240Right-handed alpha
Helix 15
AB6
A
252 264Right-handed alpha
Helix 16
AB7
A
287 310Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7OHG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 248first strand
Strand 2
A
274 282anti-parallel
Strand 3
A
342 350parallel
Strand 4
A
332 338anti-parallel
Strand 5
A
311 312anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 248first strand
Strand 2
A
274 282anti-parallel
Strand 3
A
342 350parallel
Strand 4
A
332 338anti-parallel
Strand 5
A
318 319anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il