Analysis of interatomic Contacts of Structural Units in PDB entry:
7OI0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OI0 entry

There are 11 chains in PDB entry 7OI0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ALA 1	LYS 205
F	MET 1	SER 100
H	SER 1	ALA 129
K	ARG 12	ILE 106
L	ALA 1	ALA 123
O	SER 1	ARG 88
P	MET 1	ALA 82
Q	LYS 3	VAL 82
R	GLU 19	PRO 68
T	ASN 2	ALA 86
A	A 7	G 1530

There are 31 helices in PDB entry 7OI0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	6	14	Right-handed alpha
Helix 2	AA2	D	48	65	Right-handed alpha
Helix 3	AA3	D	67	81	Right-handed alpha
Helix 4	AA4	D	84	95	Right-handed alpha
Helix 5	AA5	D	96	104	Right-handed alpha
Helix 6	AA6	D	109	119	Right-handed alpha
Helix 7	AA7	D	146	149	Right-handed 310
Helix 8	AA8	D	151	160	Right-handed alpha
Helix 9	AA9	D	195	203	Right-handed alpha
Helix 10	AB1	F	14	16	Right-handed 310
Helix 11	AB2	F	17	32	Right-handed alpha
Helix 12	AB3	F	50	54	Right-handed 310
Helix 13	AB4	F	69	81	Right-handed alpha
Helix 14	AB5	H	4	19	Right-handed alpha
Helix 15	AB6	H	29	42	Right-handed alpha
Helix 16	AB7	H	87	91	Right-handed 310
Helix 17	AB8	H	111	119	Right-handed alpha
Helix 18	AB9	K	58	72	Right-handed alpha
Helix 19	AC1	K	91	101	Right-handed alpha
Helix 20	AC2	L	2	9	Right-handed alpha
Helix 21	AC3	O	3	14	Right-handed alpha
Helix 22	AC4	O	23	46	Right-handed alpha
Helix 23	AC5	O	49	73	Right-handed alpha
Helix 24	AC6	O	73	84	Right-handed alpha
Helix 25	AC7	P	53	63	Right-handed alpha
Helix 26	AC8	P	68	82	Right-handed alpha
Helix 27	AC9	R	25	32	Right-handed 310
Helix 28	AD1	R	49	64	Right-handed alpha
Helix 29	AD2	T	3	39	Right-handed alpha
Helix 30	AD3	T	42	63	Right-handed alpha
Helix 31	AD4	T	67	86	Right-handed alpha

There are 11 sheets in PDB entry 7OI0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	128	first strand
Strand 2	D	122	124	anti-parallel
Strand 3	D	142	144	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	3	first strand
Strand 2	F	65	66	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	46	first strand
Strand 2	F	56	61	anti-parallel
Strand 3	F	7	10	anti-parallel
Strand 4	F	87	88	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	23	24	first strand
Strand 2	H	60	61	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	50	51	first strand
Strand 2	H	57	58	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	75	76	first strand
Strand 2	H	122	127	anti-parallel
Strand 3	H	85	86	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	75	76	first strand
Strand 2	H	122	127	anti-parallel
Strand 3	H	101	105	anti-parallel
Strand 4	H	108	110	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	40	45	first strand
Strand 2	K	30	34	anti-parallel
Strand 3	K	19	21	anti-parallel
Strand 4	K	82	83	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	28	31	first strand
Strand 2	L	79	83	anti-parallel
Strand 3	L	92	96	anti-parallel
Strand 4	L	61	65	parallel
Strand 5	L	49	55	anti-parallel
Strand 6	L	35	39	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	50	51	first strand
Strand 2	P	34	39	anti-parallel
Strand 3	P	14	23	anti-parallel
Strand 4	P	2	11	anti-parallel
Strand 5	P	65	67	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	7	16	first strand
Strand 2	Q	19	29	anti-parallel
Strand 3	Q	36	46	anti-parallel
Strand 4	Q	70	79	parallel
Strand 5	Q	57	67	anti-parallel
Strand 6	Q	7	16	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OI0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OI0