Analysis of interatomic Contacts of Structural Units in PDB entry:
7OI1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OI1 entry

There are 3 chains in PDB entry 7OI1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 9	ASP 386
B	PRO 9	ASP 386
C	PRO 9	ASP 386

There are 61 helices in PDB entry 7OI1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	22	Right-handed alpha
Helix 2	AA2	A	25	40	Right-handed alpha
Helix 3	AA3	A	67	71	Right-handed 310
Helix 4	AA4	A	76	83	Right-handed 310
Helix 5	AA5	A	101	103	Right-handed 310
Helix 6	AA6	A	104	114	Right-handed alpha
Helix 7	AA7	A	127	131	Right-handed alpha
Helix 8	AA8	A	145	163	Right-handed alpha
Helix 9	AA9	A	173	175	Right-handed 310
Helix 10	AB1	A	176	186	Right-handed alpha
Helix 11	AB2	A	216	222	Right-handed alpha
Helix 12	AB3	A	228	230	Right-handed 310
Helix 13	AB4	A	243	254	Right-handed alpha
Helix 14	AB5	A	259	267	Right-handed alpha
Helix 15	AB6	A	267	281	Right-handed alpha
Helix 16	AB7	A	293	295	Right-handed 310
Helix 17	AB8	A	296	300	Right-handed 310
Helix 18	AB9	A	312	326	Right-handed alpha
Helix 19	AC1	A	338	342	Right-handed 310
Helix 20	AC2	A	345	365	Right-handed alpha
Helix 21	AC3	B	11	22	Right-handed alpha
Helix 22	AC4	B	25	40	Right-handed alpha
Helix 23	AC5	B	67	71	Right-handed 310
Helix 24	AC6	B	76	83	Right-handed 310
Helix 25	AC7	B	101	103	Right-handed 310
Helix 26	AC8	B	104	114	Right-handed alpha
Helix 27	AC9	B	127	131	Right-handed alpha
Helix 28	AD1	B	145	163	Right-handed alpha
Helix 29	AD2	B	173	175	Right-handed 310
Helix 30	AD3	B	176	186	Right-handed alpha
Helix 31	AD4	B	216	222	Right-handed alpha
Helix 32	AD5	B	228	230	Right-handed 310
Helix 33	AD6	B	243	254	Right-handed alpha
Helix 34	AD7	B	259	267	Right-handed alpha
Helix 35	AD8	B	267	281	Right-handed alpha
Helix 36	AD9	B	293	295	Right-handed 310
Helix 37	AE1	B	296	300	Right-handed 310
Helix 38	AE2	B	312	326	Right-handed alpha
Helix 39	AE3	B	338	342	Right-handed 310
Helix 40	AE4	B	345	365	Right-handed alpha
Helix 41	AE5	C	11	22	Right-handed alpha
Helix 42	AE6	C	25	40	Right-handed alpha
Helix 43	AE7	C	67	71	Right-handed 310
Helix 44	AE8	C	76	83	Right-handed 310
Helix 45	AE9	C	101	103	Right-handed 310
Helix 46	AF1	C	104	113	Right-handed alpha
Helix 47	AF2	C	114	116	Right-handed 310
Helix 48	AF3	C	127	131	Right-handed alpha
Helix 49	AF4	C	145	163	Right-handed alpha
Helix 50	AF5	C	173	175	Right-handed 310
Helix 51	AF6	C	176	186	Right-handed alpha
Helix 52	AF7	C	216	222	Right-handed alpha
Helix 53	AF8	C	228	230	Right-handed 310
Helix 54	AF9	C	243	254	Right-handed alpha
Helix 55	AG1	C	259	267	Right-handed alpha
Helix 56	AG2	C	267	281	Right-handed alpha
Helix 57	AG3	C	293	295	Right-handed 310
Helix 58	AG4	C	296	300	Right-handed 310
Helix 59	AG5	C	312	327	Right-handed alpha
Helix 60	AG6	C	338	342	Right-handed 310
Helix 61	AG7	C	345	365	Right-handed alpha

There are 6 sheets in PDB entry 7OI1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	138	first strand
Strand 2	A	85	90	parallel
Strand 3	A	166	171	parallel
Strand 4	A	329	335	parallel
Strand 5	A	285	291	parallel
Strand 6	A	193	198	parallel
Strand 7	A	232	235	parallel
Strand 8	A	256	258	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	120	first strand
Strand 2	A	125	126	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	138	first strand
Strand 2	B	85	90	parallel
Strand 3	B	166	171	parallel
Strand 4	B	329	335	parallel
Strand 5	B	285	291	parallel
Strand 6	B	193	198	parallel
Strand 7	B	232	235	parallel
Strand 8	B	256	258	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	120	first strand
Strand 2	B	125	126	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	138	first strand
Strand 2	C	85	90	parallel
Strand 3	C	166	171	parallel
Strand 4	C	329	335	parallel
Strand 5	C	285	291	parallel
Strand 6	C	193	198	parallel
Strand 7	C	232	235	parallel
Strand 8	C	256	258	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	120	first strand
Strand 2	C	125	126	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OI1

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OI1