Analysis of interatomic Contacts of Structural Units in PDB entry:
7OI3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OI3 entry

There are 2 chains in PDB entry 7OI3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 ALA 2SER 395
B
 A 1 A 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 7OI3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
2 16Right-handed alpha
Helix 2
AA2
E
45 60Right-handed alpha
Helix 3
AA3
E
65 78Right-handed alpha
Helix 4
AA4
E
83 92Right-handed alpha
Helix 5
AA5
E
124 132Right-handed alpha
Helix 6
AA6
E
140 144Right-handed 310
Helix 7
AA7
E
159 176Right-handed alpha
Helix 8
AA8
E
177 180Right-handed 310
Helix 9
AA9
E
188 201Right-handed alpha
Helix 10
AB1
E
206 210Right-handed 310
Helix 11
AB2
E
212 226Right-handed alpha
Helix 12
AB3
E
227 242Right-handed alpha
Helix 13
AB4
E
248 262Right-handed alpha
Helix 14
AB5
E
266 277Right-handed alpha
Helix 15
AB6
E
281 286Right-handed 310
Helix 16
AB7
E
289 307Right-handed alpha
Helix 17
AB8
E
310 314Right-handed 310
Helix 18
AB9
E
318 328Right-handed 310
Helix 19
AC1
E
329 344Right-handed alpha
Helix 20
AC2
E
358 372Right-handed alpha
Helix 21
AC3
E
378 385Right-handed alpha
Helix 22
AC4
E
387 391Right-handed 310
Back to top of page

There is 1 sheet (AA1) in PDB entry 7OI3.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
33 40first strand
Strand 2
E
97 106parallel
Strand 3
E
114 116anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il