Analysis of interatomic Contacts of Structural Units in PDB entry:
7OI5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OI5 entry

There are 2 chains in PDB entry 7OI5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PRO 153	SER 501
D	PRO 153	SER 501

There are 5 helices in PDB entry 7OI5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	220	224	Right-handed 310
Helix 2	AA2	B	253	261	Right-handed alpha
Helix 3	AA3	B	416	418	Right-handed 310
Helix 4	AA4	D	253	260	Right-handed alpha
Helix 5	AA5	D	416	418	Right-handed 310

There are 7 sheets in PDB entry 7OI5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	245	248	first strand
Strand 2	B	270	279	anti-parallel
Strand 3	B	191	205	anti-parallel
Strand 4	B	172	185	anti-parallel
Strand 5	B	419	433	parallel
Strand 6	B	386	392	anti-parallel
Strand 7	B	316	325	anti-parallel
Strand 8	B	350	359	anti-parallel
Strand 9	B	341	345	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	265	first strand
Strand 2	B	211	216	anti-parallel
Strand 3	B	401	408	anti-parallel
Strand 4	B	413	414	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	287	296	first strand
Strand 2	B	300	309	anti-parallel
Strand 3	B	365	372	anti-parallel
Strand 4	B	330	337	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	245	248	first strand
Strand 2	D	270	279	anti-parallel
Strand 3	D	191	205	anti-parallel
Strand 4	D	172	185	anti-parallel
Strand 5	D	419	433	parallel
Strand 6	D	386	392	anti-parallel
Strand 7	D	316	325	anti-parallel
Strand 8	D	350	359	anti-parallel
Strand 9	D	341	345	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	263	265	first strand
Strand 2	D	212	215	anti-parallel
Strand 3	D	403	405	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	296	first strand
Strand 2	D	300	309	anti-parallel
Strand 3	D	363	372	anti-parallel
Strand 4	D	330	337	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	407	408	first strand
Strand 2	D	413	414	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OI5

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OI5