Analysis of interatomic Contacts of Structural Units in PDB entry:
7OIU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OIU entry

There are 6 chains in PDB entry 7OIU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	MET 1	ARG 104
A	GLY 2	SER 821
B	PRO 15	SER 821
D	GLN 13	SER 62
E	GLU 12	SER 62
F	ARG 22	SER 62

There are 63 helices in PDB entry 7OIU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	27	45	Right-handed alpha
Helix 2	AA2	C	52	67	Right-handed alpha
Helix 3	AA3	C	69	81	Right-handed alpha
Helix 4	AA4	C	86	91	Right-handed alpha
Helix 5	AA5	A	3	13	Right-handed alpha
Helix 6	AA6	A	15	20	Right-handed 310
Helix 7	AA7	A	53	72	Right-handed alpha
Helix 8	AA8	A	97	110	Right-handed alpha
Helix 9	AA9	A	134	141	Right-handed alpha
Helix 10	AB1	A	145	171	Right-handed alpha
Helix 11	AB2	A	191	202	Right-handed alpha
Helix 12	AB3	A	260	264	Right-handed 310
Helix 13	AB4	A	280	297	Right-handed alpha
Helix 14	AB5	A	303	319	Right-handed alpha
Helix 15	AB6	A	336	354	Right-handed alpha
Helix 16	AB7	A	364	371	Right-handed alpha
Helix 17	AB8	A	387	395	Right-handed alpha
Helix 18	AB9	A	455	469	Right-handed alpha
Helix 19	AC1	A	470	472	Right-handed 310
Helix 20	AC2	A	484	491	Right-handed alpha
Helix 21	AC3	A	516	528	Right-handed alpha
Helix 22	AC4	A	545	553	Right-handed alpha
Helix 23	AC5	A	582	590	Right-handed alpha
Helix 24	AC6	A	625	645	Right-handed alpha
Helix 25	AC7	A	656	661	Right-handed alpha
Helix 26	AC8	A	664	679	Right-handed alpha
Helix 27	AC9	A	689	694	Right-handed alpha
Helix 28	AD1	A	696	706	Right-handed alpha
Helix 29	AD2	A	718	725	Right-handed alpha
Helix 30	AD3	A	729	739	Right-handed alpha
Helix 31	AD4	A	777	785	Right-handed alpha
Helix 32	AD5	A	787	802	Right-handed alpha
Helix 33	AD6	A	805	807	Right-handed 310
Helix 34	AD7	A	808	820	Right-handed alpha
Helix 35	AD8	B	53	71	Right-handed alpha
Helix 36	AD9	B	97	110	Right-handed alpha
Helix 37	AE1	B	148	171	Right-handed alpha
Helix 38	AE2	B	191	202	Right-handed alpha
Helix 39	AE3	B	213	218	Right-handed alpha
Helix 40	AE4	B	260	265	Right-handed 310
Helix 41	AE5	B	280	297	Right-handed alpha
Helix 42	AE6	B	302	319	Right-handed alpha
Helix 43	AE7	B	336	354	Right-handed alpha
Helix 44	AE8	B	364	371	Right-handed alpha
Helix 45	AE9	B	388	395	Right-handed alpha
Helix 46	AF1	B	456	469	Right-handed alpha
Helix 47	AF2	B	470	472	Right-handed 310
Helix 48	AF3	B	483	491	Right-handed alpha
Helix 49	AF4	B	517	530	Right-handed alpha
Helix 50	AF5	B	628	645	Right-handed alpha
Helix 51	AF6	B	656	661	Right-handed alpha
Helix 52	AF7	B	664	679	Right-handed alpha
Helix 53	AF8	B	689	694	Right-handed alpha
Helix 54	AF9	B	699	705	Right-handed alpha
Helix 55	AG1	B	718	727	Right-handed alpha
Helix 56	AG2	B	729	740	Right-handed alpha
Helix 57	AG3	B	776	785	Right-handed alpha
Helix 58	AG4	B	787	802	Right-handed alpha
Helix 59	AG5	B	807	821	Right-handed alpha
Helix 60	AG6	D	16	26	Right-handed alpha
Helix 61	AG7	D	27	62	Right-handed alpha
Helix 62	AG8	E	20	61	Right-handed alpha
Helix 63	AG9	F	23	62	Right-handed alpha

There are 13 sheets in PDB entry 7OIU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	94	first strand
Strand 2	A	222	225	anti-parallel
Strand 3	A	231	235	anti-parallel
Strand 4	A	240	250	anti-parallel
Strand 5	A	324	334	anti-parallel
Strand 6	A	357	359	first strand

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	178	first strand
Strand 2	A	38	44	anti-parallel
Strand 3	A	118	127	anti-parallel
Strand 4	A	77	85	anti-parallel
Strand 5	A	270	278	anti-parallel
Strand 6	A	324	334	anti-parallel
Strand 7	A	240	250	anti-parallel
Strand 8	A	384	386	first strand

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	27	first strand
Strand 2	A	30	31	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	184	first strand
Strand 2	A	187	190	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	425	427	first strand
Strand 2	A	415	419	anti-parallel
Strand 3	A	757	758	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	493	494	first strand
Strand 2	A	614	615	parallel
Strand 3	A	474	477	parallel
Strand 4	A	649	652	parallel
Strand 5	A	683	687	parallel
Strand 6	A	447	450	parallel
Strand 7	A	708	712	parallel
Strand 8	A	746	750	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	26	first strand
Strand 2	B	30	33	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	178	first strand
Strand 2	B	39	44	anti-parallel
Strand 3	B	117	127	anti-parallel
Strand 4	B	76	86	anti-parallel
Strand 5	B	270	278	anti-parallel
Strand 6	B	323	334	anti-parallel
Strand 7	B	241	248	anti-parallel
Strand 8	B	359	360	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand
Strand 2	B	232	234	anti-parallel
Strand 3	B	241	248	anti-parallel
Strand 4	B	323	334	anti-parallel
Strand 5	B	384	387	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	182	first strand
Strand 2	B	189	190	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	415	418	first strand
Strand 2	B	424	427	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	447	450	first strand
Strand 2	B	708	712	parallel
Strand 3	B	746	750	anti-parallel
Strand 4	B	753	757	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	614	618	first strand
Strand 2	B	475	479	parallel
Strand 3	B	649	653	parallel
Strand 4	B	681	684	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OIU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OIU