Analysis of interatomic Contacts of Structural Units in PDB entry:
7OIW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OIW entry

There are 2 chains in PDB entry 7OIW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 12ALA 352
B
 PRO 13TRP 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 7OIW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 25Right-handed alpha
Helix 2
AA2
A
28 46Right-handed alpha
Helix 3
AA3
A
58 71Right-handed alpha
Helix 4
AA4
A
74 84Right-handed alpha
Helix 5
AA5
A
85 90Right-handed alpha
Helix 6
AA6
A
93 101Right-handed alpha
Helix 7
AA7
A
102 115Right-handed alpha
Helix 8
AA8
A
132 141Right-handed alpha
Helix 9
AA9
A
141 158Right-handed alpha
Helix 10
AB1
A
163 177Right-handed alpha
Helix 11
AB2
A
177 185Right-handed alpha
Helix 12
AB3
A
187 203Right-handed alpha
Helix 13
AB4
A
203 240Right-handed alpha
Helix 14
AB5
A
251 261Right-handed alpha
Helix 15
AB6
A
281 296Right-handed alpha
Helix 16
AB7
A
325 327Right-handed 310
Helix 17
AB8
A
337 346Right-handed alpha
Helix 18
AB9
A
347 351Right-handed 310
Helix 19
AC1
B
15 27Right-handed alpha
Helix 20
AC2
B
28 46Right-handed alpha
Helix 21
AC3
B
58 71Right-handed alpha
Helix 22
AC4
B
74 84Right-handed alpha
Helix 23
AC5
B
92 101Right-handed alpha
Helix 24
AC6
B
102 115Right-handed alpha
Helix 25
AC7
B
130 141Right-handed alpha
Helix 26
AC8
B
141 158Right-handed alpha
Helix 27
AC9
B
163 177Right-handed alpha
Helix 28
AD1
B
177 185Right-handed alpha
Helix 29
AD2
B
187 203Right-handed alpha
Helix 30
AD3
B
203 240Right-handed alpha
Helix 31
AD4
B
251 261Right-handed alpha
Helix 32
AD5
B
281 296Right-handed alpha
Helix 33
AD6
B
325 327Right-handed 310
Helix 34
AD7
B
337 346Right-handed alpha
Helix 35
AD8
B
347 349Right-handed 310
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There are 4 sheets in PDB entry 7OIW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 249first strand
Strand 2
A
273 279anti-parallel
Strand 3
A
329 336parallel
Strand 4
A
318 323anti-parallel
Strand 5
A
297 298anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 249first strand
Strand 2
A
273 279anti-parallel
Strand 3
A
329 336parallel
Strand 4
A
318 323anti-parallel
Strand 5
A
304 305anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 249first strand
Strand 2
B
273 279anti-parallel
Strand 3
B
329 336parallel
Strand 4
B
318 323anti-parallel
Strand 5
B
297 298anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 249first strand
Strand 2
B
273 279anti-parallel
Strand 3
B
329 336parallel
Strand 4
B
318 323anti-parallel
Strand 5
B
304 305anti-parallel
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