Analysis of interatomic Contacts of Structural Units in PDB entry:
7OJA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OJA entry

There is 1 chain in PDB entry 7OJA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9PHE 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7OJA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 34Right-handed alpha
Helix 2
AA2
A
46 52Right-handed alpha
Helix 3
AA3
A
62 67Right-handed alpha
Helix 4
AA4
A
74 85Right-handed alpha
Helix 5
AA5
A
85 94Right-handed alpha
Helix 6
AA6
A
108 124Right-handed alpha
Helix 7
AA7
A
136 139Right-handed 310
Helix 8
AA8
A
140 158Right-handed alpha
Helix 9
AA9
A
167 172Right-handed 310
Helix 10
AB1
A
178 203Right-handed alpha
Helix 11
AB2
A
210 219Right-handed alpha
Helix 12
AB3
A
235 246Right-handed alpha
Helix 13
AB4
A
271 286Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7OJA.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
39 44parallel
Strand 3
A
14 19parallel
Strand 4
A
98 104parallel
Strand 5
A
127 134parallel
Strand 6
A
160 165parallel
Strand 7
A
222 232parallel
Strand 8
A
305 313anti-parallel
Strand 9
A
259 266anti-parallel
Strand 10
A
291 298parallel
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