Analysis of interatomic Contacts of Structural Units in PDB entry:
7OJU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OJU entry

There are 2 chains in PDB entry 7OJU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 81HIS 294
H
 MET 1LEU 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 7OJU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
92 94Right-handed 310
Helix 2
AA2
A
95 107Right-handed alpha
Helix 3
AA3
A
112 119Right-handed alpha
Helix 4
AA4
A
198 201Right-handed 310
Helix 5
AA5
A
204 220Right-handed alpha
Helix 6
AA6
A
221 224Right-handed 310
Helix 7
AA7
A
240 250Right-handed alpha
Helix 8
AA8
A
280 286Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7OJU.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
130 134anti-parallel
Strand 3
A
143 154anti-parallel
Strand 4
A
187 196anti-parallel
Strand 5
A
229 237parallel
Strand 6
A
272 278anti-parallel
Strand 7
A
253 260anti-parallel
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