Analysis of interatomic Contacts of Structural Units in PDB entry:
7OKA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OKA entry

There are 6 chains in PDB entry 7OKA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 258
B
 MET 1ARG 258
C
 MET 1ARG 258
D
 MET 1ARG 258
E
 MET 1ARG 258
F
 MET 1ARG 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are131 helices in PDB entry 7OKA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
194 201Right-handed alpha
Helix 2
AA2
A
204 220Right-handed alpha
Helix 3
AA3
A
224 239Right-handed alpha
Helix 4
AA4
A
239 251Right-handed alpha
Helix 5
AA5
B
194 201Right-handed alpha
Helix 6
AA6
B
204 220Right-handed alpha
Helix 7
AA7
B
224 232Right-handed alpha
Helix 8
AA8
B
232 239Right-handed alpha
Helix 9
AA9
B
239 251Right-handed alpha
Helix 10
AB1
C
194 201Right-handed alpha
Helix 11
AB2
C
204 220Right-handed alpha
Helix 12
AB3
C
224 232Right-handed alpha
Helix 13
AB4
C
232 239Right-handed alpha
Helix 14
AB5
C
239 253Right-handed alpha
Helix 15
AB6
D
194 201Right-handed alpha
Helix 16
AB7
D
204 220Right-handed alpha
Helix 17
AB8
D
224 232Right-handed alpha
Helix 18
AB9
D
232 239Right-handed alpha
Helix 19
AC1
D
239 251Right-handed alpha
Helix 20
AC2
E
194 201Right-handed alpha
Helix 21
AC3
E
204 220Right-handed alpha
Helix 22
AC4
E
224 232Right-handed alpha
Helix 23
AC5
E
232 239Right-handed alpha
Helix 24
AC6
E
239 251Right-handed alpha
Helix 25
AC7
F
194 201Right-handed alpha
Helix 26
AC8
F
204 220Right-handed alpha
Helix 27
AC9
F
224 239Right-handed alpha
Helix 28
AD1
F
239 253Right-handed alpha
Helix 29
AD2
G
194 201Right-handed alpha
Helix 30
AD3
G
204 221Right-handed alpha
Helix 31
AD4
G
224 239Right-handed alpha
Helix 32
AD5
G
239 251Right-handed alpha
Helix 33
AD6
H
194 201Right-handed alpha
Helix 34
AD7
H
204 220Right-handed alpha
Helix 35
AD8
H
224 239Right-handed alpha
Helix 36
AD9
H
239 251Right-handed alpha
Helix 37
AE1
I
194 201Right-handed alpha
Helix 38
AE2
I
204 220Right-handed alpha
Helix 39
AE3
I
224 239Right-handed alpha
Helix 40
AE4
I
239 251Right-handed alpha
Helix 41
AE5
M
194 201Right-handed alpha
Helix 42
AE6
M
204 220Right-handed alpha
Helix 43
AE7
M
224 239Right-handed alpha
Helix 44
AE8
M
239 251Right-handed alpha
Helix 45
AE9
N
194 201Right-handed alpha
Helix 46
AF1
N
204 220Right-handed alpha
Helix 47
AF2
N
224 232Right-handed alpha
Helix 48
AF3
N
232 239Right-handed alpha
Helix 49
AF4
N
239 251Right-handed alpha
Helix 50
AF5
O
194 201Right-handed alpha
Helix 51
AF6
O
204 220Right-handed alpha
Helix 52
AF7
O
224 239Right-handed alpha
Helix 53
AF8
O
239 251Right-handed alpha
Helix 54
AF9
J
194 201Right-handed alpha
Helix 55
AG1
J
204 220Right-handed alpha
Helix 56
AG2
J
224 232Right-handed alpha
Helix 57
AG3
J
232 239Right-handed alpha
Helix 58
AG4
J
239 251Right-handed alpha
Helix 59
AG5
K
194 201Right-handed alpha
Helix 60
AG6
K
204 220Right-handed alpha
Helix 61
AG7
K
224 239Right-handed alpha
Helix 62
AG8
K
239 251Right-handed alpha
Helix 63
AG9
L
194 201Right-handed alpha
Helix 64
AH1
L
204 220Right-handed alpha
Helix 65
AH2
L
224 239Right-handed alpha
Helix 66
AH3
L
239 251Right-handed alpha
Helix 67
AH4
P
194 201Right-handed alpha
Helix 68
AH5
P
204 220Right-handed alpha
Helix 69
AH6
P
224 239Right-handed alpha
Helix 70
AH7
P
239 251Right-handed alpha
Helix 71
AH8
Q
194 201Right-handed alpha
Helix 72
AH9
Q
204 220Right-handed alpha
Helix 73
AI1
Q
224 239Right-handed alpha
Helix 74
AI2
Q
239 251Right-handed alpha
Helix 75
AI3
R
194 201Right-handed alpha
Helix 76
AI4
R
204 220Right-handed alpha
Helix 77
AI5
R
224 239Right-handed alpha
Helix 78
AI6
R
239 251Right-handed alpha
Helix 79
AI7
S
194 201Right-handed alpha
Helix 80
AI8
S
204 220Right-handed alpha
Helix 81
AI9
S
224 232Right-handed alpha
Helix 82
AJ1
S
234 239Right-handed alpha
Helix 83
AJ2
S
239 251Right-handed alpha
Helix 84
AJ3
T
194 201Right-handed alpha
Helix 85
AJ4
T
204 220Right-handed alpha
Helix 86
AJ5
T
225 239Right-handed alpha
Helix 87
AJ6
T
239 252Right-handed alpha
Helix 88
AJ7
U
194 201Right-handed alpha
Helix 89
AJ8
U
204 220Right-handed alpha
Helix 90
AJ9
U
224 239Right-handed alpha
Helix 91
AK1
U
239 251Right-handed alpha
Helix 92
AK2
V
194 201Right-handed alpha
Helix 93
AK3
V
204 220Right-handed alpha
Helix 94
AK4
V
224 239Right-handed alpha
Helix 95
AK5
V
239 251Right-handed alpha
Helix 96
AK6
W
194 201Right-handed alpha
Helix 97
AK7
W
204 220Right-handed alpha
Helix 98
AK8
W
224 232Right-handed alpha
Helix 99
AK9
W
232 239Right-handed alpha
Helix 100
AL1
W
239 251Right-handed alpha
Helix 101
AL2
X
194 201Right-handed alpha
Helix 102
AL3
X
204 220Right-handed alpha
Helix 103
AL4
X
224 239Right-handed alpha
Helix 104
AL5
X
239 251Right-handed alpha
Helix 105
AL6
Y
194 201Right-handed alpha
Helix 106
AL7
Y
204 220Right-handed alpha
Helix 107
AL8
Y
224 232Right-handed alpha
Helix 108
AL9
Y
232 239Right-handed alpha
Helix 109
AM1
Y
239 251Right-handed alpha
Helix 110
AM2
Z
194 201Right-handed alpha
Helix 111
AM3
Z
204 220Right-handed alpha
Helix 112
AM4
Z
224 239Right-handed alpha
Helix 113
AM5
Z
239 251Right-handed alpha
Helix 114
AM6
a
194 201Right-handed alpha
Helix 115
AM7
a
204 220Right-handed alpha
Helix 116
AM8
a
224 239Right-handed alpha
Helix 117
AM9
a
239 251Right-handed alpha
Helix 118
AN1
b
194 201Right-handed alpha
Helix 119
AN2
b
204 220Right-handed alpha
Helix 120
AN3
b
224 239Right-handed alpha
Helix 121
AN4
b
239 251Right-handed alpha
Helix 122
AN5
c
194 201Right-handed alpha
Helix 123
AN6
c
204 220Right-handed alpha
Helix 124
AN7
c
224 232Right-handed alpha
Helix 125
AN8
c
232 239Right-handed alpha
Helix 126
AN9
c
239 251Right-handed alpha
Helix 127
AO1
d
194 201Right-handed alpha
Helix 128
AO2
d
204 220Right-handed alpha
Helix 129
AO3
d
224 232Right-handed alpha
Helix 130
AO4
d
232 239Right-handed alpha
Helix 131
AO5
d
239 251Right-handed alpha
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