Analysis of interatomic Contacts of Structural Units in PDB entry:
7OKQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OKQ entry

There are 16 chains in PDB entry 7OKQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 1140
B
 ALA 1046VAL 1389
C
 LYS 41ALA 759
D
 LYS 19THR 90
E
 MET 1HIS 1140
F
 ALA 1046VAL 1389
G
 LYS 41ALA 759
H
 LYS 19THR 90
I
 MET 1HIS 1140
J
 ALA 1046VAL 1389
K
 LYS 41ALA 759
L
 LYS 19THR 90
M
 MET 1HIS 1140
N
 ALA 1046VAL 1389
O
 LYS 41ALA 759
P
 LYS 19THR 90
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are215 helices in PDB entry 7OKQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
250 255Right-handed alpha
Helix 2
AA2
A
381 384Right-handed 310
Helix 3
AA3
A
985 990Right-handed alpha
Helix 4
AA4
A
1044 1062Right-handed alpha
Helix 5
AA5
A
1064 1068Right-handed 310
Helix 6
AA6
A
1069 1075Right-handed alpha
Helix 7
AA7
A
1091 1100Right-handed alpha
Helix 8
AA8
A
1101 1110Right-handed alpha
Helix 9
AA9
A
1125 1140Right-handed alpha
Helix 10
AB1
B
1049 1056Right-handed alpha
Helix 11
AB2
B
1057 1059Right-handed 310
Helix 12
AB3
B
1060 1064Right-handed 310
Helix 13
AB4
B
1068 1077Right-handed alpha
Helix 14
AB5
B
1292 1295Right-handed 310
Helix 15
AB6
C
55 74Right-handed alpha
Helix 16
AB7
C
75 77Right-handed 310
Helix 17
AB8
C
82 94Right-handed alpha
Helix 18
AB9
C
99 117Right-handed alpha
Helix 19
AC1
C
118 122Right-handed 310
Helix 20
AC2
C
129 153Right-handed alpha
Helix 21
AC3
C
153 159Right-handed alpha
Helix 22
AC4
C
169 182Right-handed alpha
Helix 23
AC5
C
185 205Right-handed alpha
Helix 24
AC6
C
210 224Right-handed alpha
Helix 25
AC7
C
226 231Right-handed alpha
Helix 26
AC8
C
231 251Right-handed alpha
Helix 27
AC9
C
259 277Right-handed alpha
Helix 28
AD1
C
279 281Right-handed 310
Helix 29
AD2
C
282 295Right-handed alpha
Helix 30
AD3
C
298 313Right-handed alpha
Helix 31
AD4
C
315 326Right-handed alpha
Helix 32
AD5
C
334 353Right-handed alpha
Helix 33
AD6
C
354 356Right-handed 310
Helix 34
AD7
C
357 379Right-handed alpha
Helix 35
AD8
C
383 399Right-handed alpha
Helix 36
AD9
C
403 417Right-handed alpha
Helix 37
AE1
C
425 439Right-handed alpha
Helix 38
AE2
C
440 443Right-handed 310
Helix 39
AE3
C
446 463Right-handed alpha
Helix 40
AE4
C
468 481Right-handed alpha
Helix 41
AE5
C
484 487Right-handed 310
Helix 42
AE6
C
488 513Right-handed alpha
Helix 43
AE7
C
514 516Right-handed 310
Helix 44
AE8
C
544 559Right-handed alpha
Helix 45
AE9
C
593 601Right-handed alpha
Helix 46
AF1
C
610 618Right-handed alpha
Helix 47
AF2
C
620 632Right-handed alpha
Helix 48
AF3
C
670 674Right-handed 310
Helix 49
AF4
C
677 699Right-handed alpha
Helix 50
AF5
C
712 723Right-handed alpha
Helix 51
AF6
C
728 742Right-handed alpha
Helix 52
AF7
D
64 68Right-handed 310
Helix 53
AF8
D
81 86Right-handed alpha
Helix 54
AF9
E
250 255Right-handed alpha
Helix 55
AG1
E
381 384Right-handed 310
Helix 56
AG2
E
985 990Right-handed alpha
Helix 57
AG3
E
1044 1062Right-handed alpha
Helix 58
AG4
E
1064 1068Right-handed 310
Helix 59
AG5
E
1069 1074Right-handed alpha
Helix 60
AG6
E
1091 1096Right-handed alpha
Helix 61
AG7
E
1097 1100Right-handed 310
Helix 62
AG8
E
1101 1109Right-handed alpha
Helix 63
AG9
E
1125 1138Right-handed alpha
Helix 64
AH1
F
1049 1056Right-handed alpha
Helix 65
AH2
F
1057 1059Right-handed 310
Helix 66
AH3
F
1060 1064Right-handed 310
Helix 67
AH4
F
1068 1077Right-handed alpha
Helix 68
AH5
F
1292 1295Right-handed 310
Helix 69
AH6
G
55 74Right-handed alpha
Helix 70
AH7
G
75 77Right-handed 310
Helix 71
AH8
G
82 94Right-handed alpha
Helix 72
AH9
G
99 117Right-handed alpha
Helix 73
AI1
G
118 122Right-handed 310
Helix 74
AI2
G
129 153Right-handed alpha
Helix 75
AI3
G
153 159Right-handed alpha
Helix 76
AI4
G
169 182Right-handed alpha
Helix 77
AI5
G
185 205Right-handed alpha
Helix 78
AI6
G
210 224Right-handed alpha
Helix 79
AI7
G
226 231Right-handed alpha
Helix 80
AI8
G
231 251Right-handed alpha
Helix 81
AI9
G
259 277Right-handed alpha
Helix 82
AJ1
G
279 281Right-handed 310
Helix 83
AJ2
G
282 295Right-handed alpha
Helix 84
AJ3
G
298 313Right-handed alpha
Helix 85
AJ4
G
315 326Right-handed alpha
Helix 86
AJ5
G
334 353Right-handed alpha
Helix 87
AJ6
G
354 356Right-handed 310
Helix 88
AJ7
G
357 379Right-handed alpha
Helix 89
AJ8
G
383 399Right-handed alpha
Helix 90
AJ9
G
403 417Right-handed alpha
Helix 91
AK1
G
425 439Right-handed alpha
Helix 92
AK2
G
440 443Right-handed 310
Helix 93
AK3
G
446 463Right-handed alpha
Helix 94
AK4
G
468 481Right-handed alpha
Helix 95
AK5
G
484 487Right-handed 310
Helix 96
AK6
G
488 513Right-handed alpha
Helix 97
AK7
G
514 516Right-handed 310
Helix 98
AK8
G
544 559Right-handed alpha
Helix 99
AK9
G
593 601Right-handed alpha
Helix 100
AL1
G
610 618Right-handed alpha
Helix 101
AL2
G
620 632Right-handed alpha
Helix 102
AL3
G
670 674Right-handed 310
Helix 103
AL4
G
677 699Right-handed alpha
Helix 104
AL5
G
712 723Right-handed alpha
Helix 105
AL6
G
728 742Right-handed alpha
Helix 106
AL7
H
64 68Right-handed 310
Helix 107
AL8
H
81 86Right-handed alpha
Helix 108
AL9
I
250 255Right-handed alpha
Helix 109
AM1
I
381 384Right-handed 310
Helix 110
AM2
I
985 990Right-handed alpha
Helix 111
AM3
I
1044 1062Right-handed alpha
Helix 112
AM4
I
1064 1068Right-handed 310
Helix 113
AM5
I
1069 1074Right-handed alpha
Helix 114
AM6
I
1091 1096Right-handed alpha
Helix 115
AM7
I
1097 1100Right-handed 310
Helix 116
AM8
I
1101 1109Right-handed alpha
Helix 117
AM9
I
1127 1138Right-handed alpha
Helix 118
AN1
J
1049 1056Right-handed alpha
Helix 119
AN2
J
1057 1059Right-handed 310
Helix 120
AN3
J
1060 1064Right-handed 310
Helix 121
AN4
J
1068 1077Right-handed alpha
Helix 122
AN5
J
1292 1295Right-handed 310
Helix 123
AN6
K
55 74Right-handed alpha
Helix 124
AN7
K
75 77Right-handed 310
Helix 125
AN8
K
82 94Right-handed alpha
Helix 126
AN9
K
99 117Right-handed alpha
Helix 127
AO1
K
118 122Right-handed 310
Helix 128
AO2
K
129 153Right-handed alpha
Helix 129
AO3
K
153 159Right-handed alpha
Helix 130
AO4
K
169 182Right-handed alpha
Helix 131
AO5
K
185 205Right-handed alpha
Helix 132
AO6
K
210 224Right-handed alpha
Helix 133
AO7
K
226 231Right-handed alpha
Helix 134
AO8
K
231 251Right-handed alpha
Helix 135
AO9
K
259 277Right-handed alpha
Helix 136
AP1
K
279 281Right-handed 310
Helix 137
AP2
K
282 295Right-handed alpha
Helix 138
AP3
K
298 313Right-handed alpha
Helix 139
AP4
K
315 326Right-handed alpha
Helix 140
AP5
K
334 353Right-handed alpha
Helix 141
AP6
K
354 356Right-handed 310
Helix 142
AP7
K
357 379Right-handed alpha
Helix 143
AP8
K
383 399Right-handed alpha
Helix 144
AP9
K
403 417Right-handed alpha
Helix 145
AQ1
K
425 439Right-handed alpha
Helix 146
AQ2
K
440 443Right-handed 310
Helix 147
AQ3
K
446 463Right-handed alpha
Helix 148
AQ4
K
468 481Right-handed alpha
Helix 149
AQ5
K
484 487Right-handed 310
Helix 150
AQ6
K
488 513Right-handed alpha
Helix 151
AQ7
K
514 516Right-handed 310
Helix 152
AQ8
K
544 559Right-handed alpha
Helix 153
AQ9
K
593 601Right-handed alpha
Helix 154
AR1
K
610 618Right-handed alpha
Helix 155
AR2
K
620 632Right-handed alpha
Helix 156
AR3
K
670 674Right-handed 310
Helix 157
AR4
K
677 699Right-handed alpha
Helix 158
AR5
K
712 723Right-handed alpha
Helix 159
AR6
K
728 742Right-handed alpha
Helix 160
AR7
L
64 68Right-handed 310
Helix 161
AR8
L
81 86Right-handed alpha
Helix 162
AR9
M
250 255Right-handed alpha
Helix 163
AS1
M
381 384Right-handed 310
Helix 164
AS2
M
985 990Right-handed alpha
Helix 165
AS3
M
1044 1062Right-handed alpha
Helix 166
AS4
M
1064 1068Right-handed 310
Helix 167
AS5
M
1069 1074Right-handed alpha
Helix 168
AS6
M
1091 1096Right-handed alpha
Helix 169
AS7
M
1097 1100Right-handed 310
Helix 170
AS8
M
1101 1109Right-handed alpha
Helix 171
AS9
M
1125 1138Right-handed alpha
Helix 172
AT1
N
1049 1056Right-handed alpha
Helix 173
AT2
N
1057 1059Right-handed 310
Helix 174
AT3
N
1060 1064Right-handed 310
Helix 175
AT4
N
1068 1077Right-handed alpha
Helix 176
AT5
N
1292 1295Right-handed 310
Helix 177
AT6
O
55 74Right-handed alpha
Helix 178
AT7
O
75 77Right-handed 310
Helix 179
AT8
O
82 94Right-handed alpha
Helix 180
AT9
O
99 117Right-handed alpha
Helix 181
AU1
O
118 122Right-handed 310
Helix 182
AU2
O
129 153Right-handed alpha
Helix 183
AU3
O
153 159Right-handed alpha
Helix 184
AU4
O
169 182Right-handed alpha
Helix 185
AU5
O
185 205Right-handed alpha
Helix 186
AU6
O
210 224Right-handed alpha
Helix 187
AU7
O
226 231Right-handed alpha
Helix 188
AU8
O
231 251Right-handed alpha
Helix 189
AU9
O
259 277Right-handed alpha
Helix 190
AV1
O
279 281Right-handed 310
Helix 191
AV2
O
282 295Right-handed alpha
Helix 192
AV3
O
298 313Right-handed alpha
Helix 193
AV4
O
315 326Right-handed alpha
Helix 194
AV5
O
334 353Right-handed alpha
Helix 195
AV6
O
354 356Right-handed 310
Helix 196
AV7
O
357 379Right-handed alpha
Helix 197
AV8
O
383 399Right-handed alpha
Helix 198
AV9
O
403 417Right-handed alpha
Helix 199
AW1
O
425 439Right-handed alpha
Helix 200
AW2
O
440 443Right-handed 310
Helix 201
AW3
O
446 463Right-handed alpha
Helix 202
AW4
O
468 481Right-handed alpha
Helix 203
AW5
O
484 487Right-handed 310
Helix 204
AW6
O
488 513Right-handed alpha
Helix 205
AW7
O
514 516Right-handed 310
Helix 206
AW8
O
544 559Right-handed alpha
Helix 207
AW9
O
593 601Right-handed alpha
Helix 208
AX1
O
610 618Right-handed alpha
Helix 209
AX2
O
620 632Right-handed alpha
Helix 210
AX3
O
670 674Right-handed 310
Helix 211
AX4
O
677 699Right-handed alpha
Helix 212
AX5
O
712 723Right-handed alpha
Helix 213
AX6
O
728 742Right-handed alpha
Helix 214
AX7
P
64 68Right-handed 310
Helix 215
AX8
P
81 86Right-handed alpha
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