Analysis of interatomic Contacts of Structural Units in PDB entry:
7OL1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OL1 entry

There are 2 chains in PDB entry 7OL1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG -1GLY 317
B
 ARG -1GLY 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7OL1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 26Right-handed alpha
Helix 2
AA2
A
56 67Right-handed alpha
Helix 3
AA3
A
79 86Right-handed alpha
Helix 4
AA4
A
86 109Right-handed alpha
Helix 5
AA5
A
119 121Right-handed 310
Helix 6
AA6
A
140 161Right-handed alpha
Helix 7
AA7
A
185 197Right-handed alpha
Helix 8
AA8
A
215 228Right-handed alpha
Helix 9
AA9
A
229 233Right-handed 310
Helix 10
AB1
A
247 257Right-handed alpha
Helix 11
AB2
A
269 279Right-handed alpha
Helix 12
AB3
A
285 293Right-handed alpha
Helix 13
AB4
A
299 314Right-handed alpha
Helix 14
AB5
B
11 26Right-handed alpha
Helix 15
AB6
B
41 46Right-handed 310
Helix 16
AB7
B
56 67Right-handed alpha
Helix 17
AB8
B
79 86Right-handed alpha
Helix 18
AB9
B
86 108Right-handed alpha
Helix 19
AC1
B
119 121Right-handed 310
Helix 20
AC2
B
140 161Right-handed alpha
Helix 21
AC3
B
182 184Right-handed 310
Helix 22
AC4
B
185 197Right-handed alpha
Helix 23
AC5
B
214 228Right-handed alpha
Helix 24
AC6
B
229 233Right-handed 310
Helix 25
AC7
B
247 257Right-handed alpha
Helix 26
AC8
B
269 278Right-handed alpha
Helix 27
AC9
B
285 293Right-handed alpha
Helix 28
AD1
B
299 314Right-handed alpha
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There are 8 sheets in PDB entry 7OL1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
30 34parallel
Strand 3
A
4 7parallel
Strand 4
A
71 74parallel
Strand 5
A
111 113parallel
Strand 6
A
163 165parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
167 169parallel
Strand 3
A
239 240parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
211 214parallel
Strand 3
A
244 245anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 202first strand
Strand 2
A
263 266parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 51first strand
Strand 2
B
30 34parallel
Strand 3
B
4 7parallel
Strand 4
B
71 74parallel
Strand 5
B
111 113parallel
Strand 6
B
163 165parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 117first strand
Strand 2
B
167 169parallel
Strand 3
B
239 240parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 202first strand
Strand 2
B
263 266parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 212first strand
Strand 2
B
244 246anti-parallel
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