Analysis of interatomic Contacts of Structural Units in PDB entry:
7OLA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OLA entry

There are 6 chains in PDB entry 7OLA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 316	ASN 766
B	VAL 316	ASN 766
C	VAL 316	ASN 764
D	VAL 316	GLY 691
E	VAL 316	SER 675
F	VAL 316	PRO 672

There are 95 helices in PDB entry 7OLA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	316	339	Right-handed alpha
Helix 2	AA2	A	349	361	Right-handed alpha
Helix 3	AA3	A	387	399	Right-handed alpha
Helix 4	AA4	A	403	418	Right-handed alpha
Helix 5	AA5	A	475	483	Right-handed alpha
Helix 6	AA6	A	486	502	Right-handed alpha
Helix 7	AA7	A	520	532	Right-handed alpha
Helix 8	AA8	A	541	545	Right-handed 310
Helix 9	AA9	A	550	555	Right-handed 310
Helix 10	AB1	A	574	583	Right-handed alpha
Helix 11	AB2	A	618	624	Right-handed alpha
Helix 12	AB3	A	640	646	Right-handed alpha
Helix 13	AB4	A	650	664	Right-handed alpha
Helix 14	AB5	A	673	687	Right-handed alpha
Helix 15	AB6	A	687	695	Right-handed alpha
Helix 16	AB7	A	706	712	Right-handed alpha
Helix 17	AB8	A	713	719	Right-handed alpha
Helix 18	AB9	A	728	737	Right-handed alpha
Helix 19	AC1	B	317	324	Right-handed alpha
Helix 20	AC2	B	326	339	Right-handed alpha
Helix 21	AC3	B	349	361	Right-handed alpha
Helix 22	AC4	B	387	399	Right-handed alpha
Helix 23	AC5	B	403	418	Right-handed alpha
Helix 24	AC6	B	475	483	Right-handed alpha
Helix 25	AC7	B	486	501	Right-handed alpha
Helix 26	AC8	B	520	532	Right-handed alpha
Helix 27	AC9	B	541	545	Right-handed 310
Helix 28	AD1	B	550	555	Right-handed 310
Helix 29	AD2	B	574	582	Right-handed alpha
Helix 30	AD3	B	618	624	Right-handed alpha
Helix 31	AD4	B	640	646	Right-handed alpha
Helix 32	AD5	B	647	649	Right-handed 310
Helix 33	AD6	B	650	664	Right-handed alpha
Helix 34	AD7	B	673	687	Right-handed alpha
Helix 35	AD8	B	687	695	Right-handed alpha
Helix 36	AD9	B	706	711	Right-handed alpha
Helix 37	AE1	B	712	719	Right-handed alpha
Helix 38	AE2	B	729	737	Right-handed alpha
Helix 39	AE3	C	317	339	Right-handed alpha
Helix 40	AE4	C	349	361	Right-handed alpha
Helix 41	AE5	C	387	399	Right-handed alpha
Helix 42	AE6	C	403	418	Right-handed alpha
Helix 43	AE7	C	475	483	Right-handed alpha
Helix 44	AE8	C	486	502	Right-handed alpha
Helix 45	AE9	C	520	532	Right-handed alpha
Helix 46	AF1	C	533	535	Right-handed 310
Helix 47	AF2	C	541	545	Right-handed 310
Helix 48	AF3	C	550	555	Right-handed 310
Helix 49	AF4	C	574	582	Right-handed alpha
Helix 50	AF5	C	618	624	Right-handed alpha
Helix 51	AF6	C	640	646	Right-handed alpha
Helix 52	AF7	C	647	649	Right-handed 310
Helix 53	AF8	C	650	664	Right-handed alpha
Helix 54	AF9	C	673	687	Right-handed alpha
Helix 55	AG1	C	687	696	Right-handed alpha
Helix 56	AG2	C	706	718	Right-handed alpha
Helix 57	AG3	C	728	731	Right-handed 310
Helix 58	AG4	C	732	737	Right-handed alpha
Helix 59	AG5	D	317	339	Right-handed alpha
Helix 60	AG6	D	349	361	Right-handed alpha
Helix 61	AG7	D	387	399	Right-handed alpha
Helix 62	AG8	D	403	418	Right-handed alpha
Helix 63	AG9	D	475	484	Right-handed alpha
Helix 64	AH1	D	486	502	Right-handed alpha
Helix 65	AH2	D	520	533	Right-handed alpha
Helix 66	AH3	D	574	583	Right-handed alpha
Helix 67	AH4	D	618	624	Right-handed alpha
Helix 68	AH5	D	640	646	Right-handed alpha
Helix 69	AH6	D	650	664	Right-handed alpha
Helix 70	AH7	D	672	687	Right-handed alpha
Helix 71	AH8	E	317	338	Right-handed alpha
Helix 72	AH9	E	349	361	Right-handed alpha
Helix 73	AI1	E	387	399	Right-handed alpha
Helix 74	AI2	E	403	418	Right-handed alpha
Helix 75	AI3	E	474	483	Right-handed alpha
Helix 76	AI4	E	486	501	Right-handed alpha
Helix 77	AI5	E	520	532	Right-handed alpha
Helix 78	AI6	E	541	545	Right-handed 310
Helix 79	AI7	E	550	555	Right-handed 310
Helix 80	AI8	E	576	582	Right-handed alpha
Helix 81	AI9	E	618	624	Right-handed alpha
Helix 82	AJ1	E	650	664	Right-handed alpha
Helix 83	AJ2	F	317	324	Right-handed alpha
Helix 84	AJ3	F	326	339	Right-handed alpha
Helix 85	AJ4	F	349	361	Right-handed alpha
Helix 86	AJ5	F	387	399	Right-handed alpha
Helix 87	AJ6	F	403	418	Right-handed alpha
Helix 88	AJ7	F	475	483	Right-handed alpha
Helix 89	AJ8	F	486	502	Right-handed alpha
Helix 90	AJ9	F	520	532	Right-handed alpha
Helix 91	AK1	F	550	555	Right-handed 310
Helix 92	AK2	F	575	582	Right-handed alpha
Helix 93	AK3	F	618	624	Right-handed alpha
Helix 94	AK4	F	640	646	Right-handed alpha
Helix 95	AK5	F	650	664	Right-handed alpha

There are 29 sheets in PDB entry 7OLA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	365	first strand
Strand 2	A	374	377	anti-parallel
Strand 3	A	384	385	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	431	first strand
Strand 2	A	436	438	anti-parallel
Strand 3	A	443	445	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	469	470	first strand
Strand 2	A	473	474	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	537	539	first strand
Strand 2	A	559	565	parallel
Strand 3	A	603	608	parallel
Strand 4	A	510	514	parallel
Strand 5	A	625	628	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	570	571	first strand
Strand 2	A	613	614	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	585	588	first strand
Strand 2	A	596	599	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	365	first strand
Strand 2	B	374	377	anti-parallel
Strand 3	B	384	385	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	429	431	first strand
Strand 2	B	436	438	anti-parallel
Strand 3	B	443	445	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	469	470	first strand
Strand 2	B	473	474	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	537	539	first strand
Strand 2	B	559	565	parallel
Strand 3	B	603	608	parallel
Strand 4	B	510	514	parallel
Strand 5	B	625	629	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	570	571	first strand
Strand 2	B	613	614	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	585	588	first strand
Strand 2	B	596	599	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	363	365	first strand
Strand 2	C	374	377	anti-parallel
Strand 3	C	384	385	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	429	431	first strand
Strand 2	C	436	438	anti-parallel
Strand 3	C	443	445	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	469	470	first strand
Strand 2	C	473	474	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	537	539	first strand
Strand 2	C	559	562	parallel
Strand 3	C	603	608	parallel
Strand 4	C	510	514	parallel
Strand 5	C	625	629	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	585	588	first strand
Strand 2	C	596	599	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	363	365	first strand
Strand 2	D	374	377	anti-parallel
Strand 3	D	384	385	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	429	432	first strand
Strand 2	D	435	438	anti-parallel
Strand 3	D	443	445	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	469	470	first strand
Strand 2	D	473	474	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	537	539	first strand
Strand 2	D	559	565	parallel
Strand 3	D	604	608	parallel
Strand 4	D	510	514	parallel
Strand 5	D	625	629	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	363	365	first strand
Strand 2	E	374	377	anti-parallel
Strand 3	E	384	385	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	429	431	first strand
Strand 2	E	436	438	anti-parallel
Strand 3	E	443	445	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	537	538	first strand
Strand 2	E	559	564	parallel
Strand 3	E	603	608	parallel
Strand 4	E	510	514	parallel
Strand 5	E	625	629	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	586	590	first strand
Strand 2	E	593	598	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	363	365	first strand
Strand 2	F	374	377	anti-parallel
Strand 3	F	384	385	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	429	432	first strand
Strand 2	F	435	438	anti-parallel
Strand 3	F	443	445	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	537	538	first strand
Strand 2	F	559	561	parallel
Strand 3	F	603	609	parallel
Strand 4	F	510	515	parallel
Strand 5	F	625	629	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	586	588	first strand
Strand 2	F	596	598	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OLA

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OLA