Analysis of interatomic Contacts of Structural Units in PDB entry:
7OM5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OM5 entry

There are 2 chains in PDB entry 7OM5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1ARG 130
B
 GLN 1SER 125
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7OM5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 32Right-handed 310
Helix 2
AA2
A
61 64Right-handed 310
Helix 3
AA3
A
73 75Right-handed 310
Helix 4
AA4
A
86 90Right-handed 310
Helix 5
AA5
A
105 109Right-handed 310
Helix 6
AA6
A
122 126Right-handed 310
Helix 7
AA7
B
28 32Right-handed 310
Helix 8
AA8
B
61 64Right-handed 310
Helix 9
AA9
B
73 75Right-handed 310
Helix 10
AB1
B
86 90Right-handed 310
Helix 11
AB2
B
105 109Right-handed 310
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There are 4 sheets in PDB entry 7OM5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 7first strand
Strand 2
A
18 26anti-parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
67 72anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
46 51anti-parallel
Strand 3
A
33 39anti-parallel
Strand 4
A
91 98anti-parallel
Strand 5
A
116 120anti-parallel
Strand 6
A
10 12parallel
Strand 7
B
10 12anti-parallel
Strand 8
B
116 120parallel
Strand 9
B
91 98anti-parallel
Strand 10
B
33 39anti-parallel
Strand 11
B
46 51anti-parallel
Strand 12
B
57 59anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
91 98anti-parallel
Strand 3
A
116 120anti-parallel
Strand 4
A
10 12parallel
Strand 5
B
10 12anti-parallel
Strand 6
B
116 120parallel
Strand 7
B
91 98anti-parallel
Strand 8
B
111 112anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 7first strand
Strand 2
B
18 26anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
67 72anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il