Analysis of interatomic Contacts of Structural Units in PDB entry:
7OME


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OME entry

There is 1 chain in PDB entry 7OME (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 12LYS 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7OME. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 20Right-handed alpha
Helix 2
AA2
A
54 59Right-handed 310
Helix 3
AA3
A
61 65Right-handed 310
Helix 4
AA4
A
91 104Right-handed alpha
Helix 5
AA5
A
118 131Right-handed alpha
Helix 6
AA6
A
157 166Right-handed alpha
Helix 7
AA7
A
167 175Right-handed alpha
Helix 8
AA8
A
177 182Right-handed alpha
Helix 9
AA9
A
182 187Right-handed alpha
Helix 10
AB1
A
193 202Right-handed alpha
Helix 11
AB2
A
203 205Right-handed 310
Helix 12
AB3
A
208 210Right-handed 310
Helix 13
AB4
A
211 220Right-handed alpha
Helix 14
AB5
A
228 243Right-handed alpha
Helix 15
AB6
A
260 268Right-handed alpha
Helix 16
AB7
A
284 288Right-handed 310
Helix 17
AB8
A
289 304Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7OME.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 26first strand
Strand 2
A
29 35anti-parallel
Strand 3
A
70 74anti-parallel
Strand 4
A
44 48parallel
Strand 5
A
112 117parallel
Strand 6
A
135 141parallel
Strand 7
A
250 257parallel
Strand 8
A
274 281parallel
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