Analysis of interatomic Contacts of Structural Units in PDB entry:
7OML


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OML entry

There is 1 chain in PDB entry 7OML (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLY 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7OML. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 34Right-handed alpha
Helix 2
AA2
A
35 37Right-handed 310
Helix 3
AA3
A
51 66Right-handed alpha
Helix 4
AA4
A
78 89Right-handed alpha
Helix 5
AA5
A
120 131Right-handed alpha
Helix 6
AA6
A
142 146Right-handed 310
Helix 7
AA7
A
154 166Right-handed alpha
Helix 8
AA8
A
185 196Right-handed alpha
Helix 9
AA9
A
221 232Right-handed alpha
Helix 10
AB1
A
257 272Right-handed alpha
Helix 11
AB2
A
275 277Right-handed 310
Helix 12
AB3
A
287 297Right-handed alpha
Helix 13
AB4
A
307 318Right-handed alpha
Helix 14
AB5
A
340 356Right-handed alpha
Helix 15
AB6
A
358 365Right-handed alpha
Helix 16
AB7
A
389 402Right-handed alpha
Helix 17
AB8
A
426 445Right-handed alpha
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There are 4 sheets in PDB entry 7OML. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
106 113anti-parallel
Strand 3
A
93 97anti-parallel
Strand 4
A
42 47parallel
Strand 5
A
70 76parallel
Strand 6
A
148 149parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 203first strand
Strand 2
A
175 179parallel
Strand 3
A
235 239parallel
Strand 4
A
246 249anti-parallel
Strand 5
A
255 256anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 304first strand
Strand 2
A
279 283parallel
Strand 3
A
322 324parallel
Strand 4
A
330 332anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 377first strand
Strand 2
A
417 423anti-parallel
Strand 3
A
406 411anti-parallel
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