Analysis of interatomic Contacts of Structural Units in PDB entry:
7ONO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ONO entry

There is 1 chain in PDB entry 7ONO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 69THR 569
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7ONO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
171 174Right-handed 310
Helix 2
AA2
A
175 180Right-handed alpha
Helix 3
AA3
A
190 196Right-handed alpha
Helix 4
AA4
A
196 202Right-handed alpha
Helix 5
AA5
A
237 255Right-handed alpha
Helix 6
AA6
A
290 294Right-handed 310
Helix 7
AA7
A
296 301Right-handed alpha
Helix 8
AA8
A
305 308Right-handed 310
Helix 9
AA9
A
309 320Right-handed alpha
Helix 10
AB1
A
352 359Right-handed alpha
Helix 11
AB2
A
360 370Right-handed alpha
Helix 12
AB3
A
373 383Right-handed alpha
Helix 13
AB4
A
410 417Right-handed alpha
Helix 14
AB5
A
424 437Right-handed alpha
Helix 15
AB6
A
460 471Right-handed alpha
Helix 16
AB7
A
472 475Right-handed 310
Helix 17
AB8
A
481 485Right-handed 310
Helix 18
AB9
A
546 561Right-handed alpha
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There are 5 sheets in PDB entry 7ONO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 168first strand
Strand 2
A
81 87anti-parallel
Strand 3
A
74 75anti-parallel
Strand 4
A
232 233parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 278first strand
Strand 2
A
257 266anti-parallel
Strand 3
A
526 535anti-parallel
Strand 4
A
507 519anti-parallel
Strand 5
A
492 501anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 330first strand
Strand 2
A
349 351anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 335first strand
Strand 2
A
340 341anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 441first strand
Strand 2
A
456 457anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il