Analysis of interatomic Contacts of Structural Units in PDB entry:
7OO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OO5 entry

There is 1 chain in PDB entry 7OO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7OO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 16Right-handed 310
Helix 2
AA2
A
17 29Right-handed alpha
Helix 3
AA3
A
36 52Right-handed alpha
Helix 4
AA4
A
65 70Right-handed alpha
Helix 5
AA5
A
70 75Right-handed alpha
Helix 6
AA6
A
76 81Right-handed 310
Helix 7
AA7
A
82 96Right-handed alpha
Helix 8
AA8
A
100 115Right-handed alpha
Helix 9
AA9
A
146 158Right-handed alpha
Helix 10
AB1
A
160 168Right-handed alpha
Helix 11
AB2
A
169 173Right-handed 310
Helix 12
AB3
A
197 203Right-handed alpha
Helix 13
AB4
A
232 240Right-handed alpha
Helix 14
AB5
A
243 249Right-handed alpha
Helix 15
AB6
A
253 269Right-handed alpha
Helix 16
AB7
A
280 283Right-handed 310
Helix 17
AB8
A
300 304Right-handed 310
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There are 3 sheets in PDB entry 7OO5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
277 278anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 176first strand
Strand 2
A
186 187anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
230 231anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il