Analysis of interatomic Contacts of Structural Units in PDB entry:
7OOE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OOE entry

There are 4 chains in PDB entry 7OOE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 33	PRO 390
A	LYS 392	ALA 418
B	GLU 33	PRO 390
B	LYS 392	ASP 414

There are 37 helices in PDB entry 7OOE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	81	87	Right-handed alpha
Helix 2	AA2	A	91	93	Right-handed 310
Helix 3	AA3	A	98	102	Right-handed 310
Helix 4	AA4	A	109	116	Right-handed alpha
Helix 5	AA5	A	117	119	Right-handed 310
Helix 6	AA6	A	145	166	Right-handed alpha
Helix 7	AA7	A	181	195	Right-handed alpha
Helix 8	AA8	A	205	213	Right-handed alpha
Helix 9	AA9	A	259	279	Right-handed alpha
Helix 10	AB1	A	283	286	Right-handed 310
Helix 11	AB2	A	287	305	Right-handed alpha
Helix 12	AB3	A	330	337	Right-handed alpha
Helix 13	AB4	A	337	343	Right-handed alpha
Helix 14	AB5	A	344	355	Right-handed alpha
Helix 15	AB6	A	358	362	Right-handed 310
Helix 16	AB7	A	369	373	Right-handed 310
Helix 17	AB8	A	374	385	Right-handed alpha
Helix 18	AB9	A	398	412	Right-handed alpha
Helix 19	AC1	B	81	87	Right-handed alpha
Helix 20	AC2	B	91	93	Right-handed 310
Helix 21	AC3	B	98	102	Right-handed 310
Helix 22	AC4	B	109	116	Right-handed alpha
Helix 23	AC5	B	117	119	Right-handed 310
Helix 24	AC6	B	145	166	Right-handed alpha
Helix 25	AC7	B	181	195	Right-handed alpha
Helix 26	AC8	B	205	213	Right-handed alpha
Helix 27	AC9	B	214	218	Right-handed 310
Helix 28	AD1	B	259	279	Right-handed alpha
Helix 29	AD2	B	283	286	Right-handed 310
Helix 30	AD3	B	287	305	Right-handed alpha
Helix 31	AD4	B	330	337	Right-handed alpha
Helix 32	AD5	B	337	343	Right-handed alpha
Helix 33	AD6	B	344	355	Right-handed alpha
Helix 34	AD7	B	358	362	Right-handed 310
Helix 35	AD8	B	369	373	Right-handed 310
Helix 36	AD9	B	374	385	Right-handed alpha
Helix 37	AE1	B	398	412	Right-handed alpha

There are 12 sheets in PDB entry 7OOE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	57	first strand
Strand 2	A	44	51	anti-parallel
Strand 3	A	67	68	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	57	first strand
Strand 2	A	44	51	anti-parallel
Strand 3	A	35	39	anti-parallel
Strand 4	A	171	176	parallel
Strand 5	A	198	204	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	80	first strand
Strand 2	A	71	73	anti-parallel
Strand 3	A	95	96	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	125	first strand
Strand 2	A	131	137	anti-parallel
Strand 3	A	140	144	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	246	255	first strand
Strand 2	A	235	243	anti-parallel
Strand 3	A	223	230	anti-parallel
Strand 4	A	364	368	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	310	319	first strand
Strand 2	A	322	329	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	57	first strand
Strand 2	B	44	51	anti-parallel
Strand 3	B	67	68	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	57	first strand
Strand 2	B	44	51	anti-parallel
Strand 3	B	35	39	anti-parallel
Strand 4	B	171	176	parallel
Strand 5	B	198	204	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	80	first strand
Strand 2	B	71	73	anti-parallel
Strand 3	B	95	96	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	125	first strand
Strand 2	B	131	137	anti-parallel
Strand 3	B	140	144	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	255	first strand
Strand 2	B	235	243	anti-parallel
Strand 3	B	224	230	anti-parallel
Strand 4	B	364	368	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	310	319	first strand
Strand 2	B	322	329	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OOE

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OOE