Analysis of interatomic Contacts of Structural Units in PDB entry:
7OP5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OP5 entry

There is 1 chain in PDB entry 7OP5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 204LYS 1385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7OP5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
241 251Right-handed alpha
Helix 2
AA2
A
252 260Right-handed alpha
Helix 3
AA3
A
264 268Right-handed 310
Helix 4
AA4
A
368 373Right-handed alpha
Helix 5
AA5
A
383 392Right-handed alpha
Helix 6
AA6
A
396 410Right-handed alpha
Helix 7
AA7
A
412 444Right-handed alpha
Helix 8
AA8
A
498 503Right-handed alpha
Helix 9
AA9
A
529 535Right-handed alpha
Helix 10
AB1
A
565 568Right-handed 310
Helix 11
AB2
A
569 580Right-handed alpha
Helix 12
AB3
A
589 618Right-handed alpha
Helix 13
AB4
A
620 625Right-handed 310
Helix 14
AB5
A
629 636Right-handed alpha
Helix 15
AB6
A
639 657Right-handed alpha
Helix 16
AB7
A
664 674Right-handed 310
Helix 17
AB8
A
711 718Right-handed alpha
Helix 18
AB9
A
748 759Right-handed alpha
Helix 19
AC1
A
773 784Right-handed alpha
Helix 20
AC2
A
867 871Right-handed 310
Helix 21
AC3
A
880 890Right-handed alpha
Helix 22
AC4
A
909 914Right-handed alpha
Helix 23
AC5
A
915 920Right-handed alpha
Helix 24
AC6
A
938 949Right-handed alpha
Helix 25
AC7
A
963 972Right-handed alpha
Helix 26
AC8
A
1044 1052Right-handed alpha
Helix 27
AC9
A
1056 1065Right-handed alpha
Helix 28
AD1
A
1072 1086Right-handed alpha
Helix 29
AD2
A
1096 1098Right-handed 310
Helix 30
AD3
A
1099 1106Right-handed alpha
Helix 31
AD4
A
1117 1121Right-handed 310
Helix 32
AD5
A
1132 1167Right-handed alpha
Helix 33
AD6
A
1178 1186Right-handed alpha
Helix 34
AD7
A
1187 1195Right-handed alpha
Helix 35
AD8
A
1219 1243Right-handed alpha
Helix 36
AD9
A
1264 1281Right-handed alpha
Helix 37
AE1
A
1294 1314Right-handed alpha
Helix 38
AE2
A
1316 1323Right-handed alpha
Helix 39
AE3
A
1329 1353Right-handed alpha
Helix 40
AE4
A
1353 1368Right-handed alpha
Helix 41
AE5
A
1378 1383Right-handed alpha
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There are 10 sheets in PDB entry 7OP5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
219 223anti-parallel
Strand 3
A
270 274anti-parallel
Strand 4
A
280 283anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
328 333anti-parallel
Strand 3
A
338 341anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
450 455first strand
Strand 2
A
458 463anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 474first strand
Strand 2
A
559 564anti-parallel
Strand 3
A
486 489anti-parallel
Strand 4
A
536 537anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 510first strand
Strand 2
A
494 497anti-parallel
Strand 3
A
542 546anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
660 662first strand
Strand 2
A
1123 1125anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1067 1068first strand
Strand 2
A
952 956parallel
Strand 3
A
676 679parallel
Strand 4
A
1090 1092parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 697first strand
Strand 2
A
924 932anti-parallel
Strand 3
A
895 903anti-parallel
Strand 4
A
857 863anti-parallel
Strand 5
A
845 851anti-parallel
Strand 6
A
830 836anti-parallel
Strand 7
A
792 793anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 765first strand
Strand 2
A
770 771anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
996 1001first strand
Strand 2
A
979 987anti-parallel
Strand 3
A
1037 1039parallel
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