Analysis of interatomic Contacts of Structural Units in PDB entry:
7OP8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OP8 entry

There is 1 chain in PDB entry 7OP8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 74	GLN 1394

There are 40 helices in PDB entry 7OP8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	228	240	Right-handed alpha
Helix 2	AA2	A	242	250	Right-handed alpha
Helix 3	AA3	A	252	259	Right-handed alpha
Helix 4	AA4	A	293	297	Right-handed 310
Helix 5	AA5	A	363	373	Right-handed alpha
Helix 6	AA6	A	388	393	Right-handed alpha
Helix 7	AA7	A	396	408	Right-handed alpha
Helix 8	AA8	A	412	444	Right-handed alpha
Helix 9	AA9	A	514	519	Right-handed alpha
Helix 10	AB1	A	529	535	Right-handed alpha
Helix 11	AB2	A	565	568	Right-handed 310
Helix 12	AB3	A	569	579	Right-handed alpha
Helix 13	AB4	A	587	591	Right-handed 310
Helix 14	AB5	A	593	614	Right-handed alpha
Helix 15	AB6	A	619	630	Right-handed alpha
Helix 16	AB7	A	639	658	Right-handed alpha
Helix 17	AB8	A	664	668	Right-handed 310
Helix 18	AB9	A	669	674	Right-handed 310
Helix 19	AC1	A	748	760	Right-handed alpha
Helix 20	AC2	A	773	784	Right-handed alpha
Helix 21	AC3	A	880	891	Right-handed alpha
Helix 22	AC4	A	915	919	Right-handed 310
Helix 23	AC5	A	938	949	Right-handed alpha
Helix 24	AC6	A	960	971	Right-handed alpha
Helix 25	AC7	A	1042	1053	Right-handed alpha
Helix 26	AC8	A	1054	1064	Right-handed alpha
Helix 27	AC9	A	1072	1086	Right-handed alpha
Helix 28	AD1	A	1100	1105	Right-handed alpha
Helix 29	AD2	A	1131	1143	Right-handed alpha
Helix 30	AD3	A	1144	1167	Right-handed alpha
Helix 31	AD4	A	1168	1170	Right-handed 310
Helix 32	AD5	A	1178	1187	Right-handed alpha
Helix 33	AD6	A	1188	1196	Right-handed alpha
Helix 34	AD7	A	1215	1243	Right-handed alpha
Helix 35	AD8	A	1260	1282	Right-handed alpha
Helix 36	AD9	A	1297	1313	Right-handed alpha
Helix 37	AE1	A	1316	1323	Right-handed alpha
Helix 38	AE2	A	1329	1352	Right-handed alpha
Helix 39	AE3	A	1354	1363	Right-handed alpha
Helix 40	AE4	A	1377	1392	Right-handed alpha

There are 12 sheets in PDB entry 7OP8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	209	first strand
Strand 2	A	218	225	anti-parallel
Strand 3	A	260	262	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	209	first strand
Strand 2	A	218	225	anti-parallel
Strand 3	A	270	274	anti-parallel
Strand 4	A	280	284	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	325	first strand
Strand 2	A	328	331	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	455	first strand
Strand 2	A	458	462	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	472	473	first strand
Strand 2	A	560	562	anti-parallel
Strand 3	A	487	489	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	508	510	first strand
Strand 2	A	494	497	anti-parallel
Strand 3	A	542	546	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	660	662	first strand
Strand 2	A	1123	1125	anti-parallel
Strand 3	A	1110	1111	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	952	955	first strand
Strand 2	A	676	679	parallel
Strand 3	A	1090	1093	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	704	705	first strand
Strand 2	A	691	699	anti-parallel
Strand 3	A	924	932	anti-parallel
Strand 4	A	894	903	anti-parallel
Strand 5	A	857	863	anti-parallel
Strand 6	A	844	851	anti-parallel
Strand 7	A	830	835	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	764	765	first strand
Strand 2	A	770	771	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	981	986	first strand
Strand 2	A	996	1001	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1039	1041	first strand
Strand 2	A	1065	1068	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OP8

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OP8