Analysis of interatomic Contacts of Structural Units in PDB entry:
7OQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OQ6 entry

There are 2 chains in PDB entry 7OQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9TRP 407
B
 ALA 9TRP 407
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 7OQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 28Right-handed 310
Helix 2
AA2
A
51 60Right-handed alpha
Helix 3
AA3
A
79 89Right-handed alpha
Helix 4
AA4
A
90 97Right-handed 310
Helix 5
AA5
A
100 108Right-handed alpha
Helix 6
AA6
A
109 113Right-handed 310
Helix 7
AA7
A
114 120Right-handed alpha
Helix 8
AA8
A
121 140Right-handed alpha
Helix 9
AA9
A
145 149Right-handed alpha
Helix 10
AB1
A
151 163Right-handed alpha
Helix 11
AB2
A
165 167Right-handed 310
Helix 12
AB3
A
168 181Right-handed alpha
Helix 13
AB4
A
187 212Right-handed alpha
Helix 14
AB5
A
216 227Right-handed alpha
Helix 15
AB6
A
232 246Right-handed alpha
Helix 16
AB7
A
247 265Right-handed alpha
Helix 17
AB8
A
265 275Right-handed alpha
Helix 18
AB9
A
275 291Right-handed alpha
Helix 19
AC1
A
292 295Right-handed 310
Helix 20
AC2
A
322 327Right-handed alpha
Helix 21
AC3
A
353 357Right-handed 310
Helix 22
AC4
A
360 379Right-handed alpha
Helix 23
AC5
B
23 28Right-handed 310
Helix 24
AC6
B
51 60Right-handed alpha
Helix 25
AC7
B
79 90Right-handed alpha
Helix 26
AC8
B
91 97Right-handed 310
Helix 27
AC9
B
100 110Right-handed alpha
Helix 28
AD1
B
111 113Right-handed 310
Helix 29
AD2
B
114 120Right-handed alpha
Helix 30
AD3
B
121 139Right-handed alpha
Helix 31
AD4
B
145 149Right-handed alpha
Helix 32
AD5
B
151 162Right-handed alpha
Helix 33
AD6
B
165 181Right-handed alpha
Helix 34
AD7
B
187 211Right-handed alpha
Helix 35
AD8
B
216 227Right-handed alpha
Helix 36
AD9
B
232 246Right-handed alpha
Helix 37
AE1
B
247 265Right-handed alpha
Helix 38
AE2
B
265 275Right-handed alpha
Helix 39
AE3
B
275 291Right-handed alpha
Helix 40
AE4
B
292 295Right-handed 310
Helix 41
AE5
B
322 327Right-handed alpha
Helix 42
AE6
B
353 357Right-handed 310
Helix 43
AE7
B
360 379Right-handed alpha
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There are 6 sheets in PDB entry 7OQ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
298 302anti-parallel
Strand 3
A
318 321anti-parallel
Strand 4
A
45 49parallel
Strand 5
A
36 39anti-parallel
Strand 6
B
391 392parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 144first strand
Strand 2
A
404 406anti-parallel
Strand 3
A
383 384anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 308first strand
Strand 2
A
311 313anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
B
36 39parallel
Strand 3
B
45 49anti-parallel
Strand 4
B
318 321parallel
Strand 5
B
298 302anti-parallel
Strand 6
B
64 65anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 144first strand
Strand 2
B
404 406anti-parallel
Strand 3
B
383 384anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 308first strand
Strand 2
B
311 313anti-parallel
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