Analysis of interatomic Contacts of Structural Units in PDB entry:
7OQY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OQY entry

There are 14 chains in PDB entry 7OQY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	ARG 880
B	MET 1	LEU 1120
C	MET 1	ARG 393
D	MET 1	LYS 264
E	MET 1	SER 182
F	MET 1	LYS 109
G	MET 4	HIS 125
H	LYS 8	GLY 84
K	MET 1	ILE 86
L	MET 1	ILE 90
N	MET 1	ILE 66
P	ALA 2	ILE 48
Q	SER 36	SER 78
Y	MET 1	ILE 92

There are137 helices in PDB entry 7OQY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	23	Right-handed alpha
Helix 2	AA2	A	86	96	Right-handed alpha
Helix 3	AA3	A	107	122	Right-handed alpha
Helix 4	AA4	A	125	142	Right-handed alpha
Helix 5	AA5	A	176	185	Right-handed alpha
Helix 6	AA6	A	188	195	Right-handed alpha
Helix 7	AA7	A	203	206	Right-handed 310
Helix 8	AA8	A	216	220	Right-handed 310
Helix 9	AA9	A	233	255	Right-handed alpha
Helix 10	AB1	A	260	278	Right-handed alpha
Helix 11	AB2	A	297	301	Right-handed 310
Helix 12	AB3	A	307	313	Right-handed alpha
Helix 13	AB4	A	340	347	Right-handed alpha
Helix 14	AB5	A	357	367	Right-handed alpha
Helix 15	AB6	A	389	391	Right-handed 310
Helix 16	AB7	A	393	400	Right-handed alpha
Helix 17	AB8	A	426	428	Right-handed 310
Helix 18	AB9	A	446	448	Right-handed 310
Helix 19	AC1	A	449	454	Right-handed alpha
Helix 20	AC2	A	469	480	Right-handed alpha
Helix 21	AC3	A	481	485	Right-handed 310
Helix 22	AC4	A	500	511	Right-handed alpha
Helix 23	AC5	A	517	526	Right-handed alpha
Helix 24	AC6	A	548	553	Right-handed alpha
Helix 25	AC7	A	554	556	Right-handed 310
Helix 26	AC8	A	567	571	Right-handed 310
Helix 27	AC9	A	599	604	Right-handed alpha
Helix 28	AD1	A	610	620	Right-handed alpha
Helix 29	AD2	A	620	643	Right-handed alpha
Helix 30	AD3	A	647	652	Right-handed 310
Helix 31	AD4	A	654	681	Right-handed alpha
Helix 32	AD5	A	694	718	Right-handed alpha
Helix 33	AD6	A	723	731	Right-handed alpha
Helix 34	AD7	A	736	745	Right-handed alpha
Helix 35	AD8	A	775	779	Right-handed 310
Helix 36	AD9	A	791	802	Right-handed alpha
Helix 37	AE1	A	803	806	Right-handed 310
Helix 38	AE2	A	814	828	Right-handed alpha
Helix 39	AE3	A	867	877	Right-handed alpha
Helix 40	AE4	B	3	18	Right-handed alpha
Helix 41	AE5	B	21	44	Right-handed alpha
Helix 42	AE6	B	79	87	Right-handed alpha
Helix 43	AE7	B	126	130	Right-handed 310
Helix 44	AE8	B	132	139	Right-handed alpha
Helix 45	AE9	B	221	227	Right-handed alpha
Helix 46	AF1	B	232	241	Right-handed alpha
Helix 47	AF2	B	243	248	Right-handed alpha
Helix 48	AF3	B	250	257	Right-handed alpha
Helix 49	AF4	B	262	275	Right-handed alpha
Helix 50	AF5	B	281	292	Right-handed alpha
Helix 51	AF6	B	296	300	Right-handed 310
Helix 52	AF7	B	302	304	Right-handed 310
Helix 53	AF8	B	305	325	Right-handed alpha
Helix 54	AF9	B	335	337	Right-handed 310
Helix 55	AG1	B	343	369	Right-handed alpha
Helix 56	AG2	B	378	383	Right-handed alpha
Helix 57	AG3	B	387	399	Right-handed alpha
Helix 58	AG4	B	416	424	Right-handed alpha
Helix 59	AG5	B	444	448	Right-handed 310
Helix 60	AG6	B	479	490	Right-handed alpha
Helix 61	AG7	B	494	504	Right-handed alpha
Helix 62	AG8	B	508	513	Right-handed alpha
Helix 63	AG9	B	530	544	Right-handed alpha
Helix 64	AH1	B	588	597	Right-handed alpha
Helix 65	AH2	B	601	608	Right-handed alpha
Helix 66	AH3	B	617	622	Right-handed 310
Helix 67	AH4	B	627	631	Right-handed 310
Helix 68	AH5	B	641	646	Right-handed 310
Helix 69	AH6	B	649	653	Right-handed 310
Helix 70	AH7	B	655	659	Right-handed 310
Helix 71	AH8	B	660	671	Right-handed alpha
Helix 72	AH9	B	681	685	Right-handed 310
Helix 73	AI1	B	703	709	Right-handed alpha
Helix 74	AI2	B	740	745	Right-handed alpha
Helix 75	AI3	B	764	768	Right-handed 310
Helix 76	AI4	B	783	787	Right-handed 310
Helix 77	AI5	B	909	913	Right-handed 310
Helix 78	AI6	B	918	935	Right-handed alpha
Helix 79	AI7	B	948	959	Right-handed alpha
Helix 80	AI8	B	995	999	Right-handed 310
Helix 81	AI9	B	1028	1039	Right-handed alpha
Helix 82	AJ1	B	1040	1049	Right-handed alpha
Helix 83	AJ2	B	1094	1106	Right-handed alpha
Helix 84	AJ3	C	3	15	Right-handed alpha
Helix 85	AJ4	C	22	34	Right-handed alpha
Helix 86	AJ5	C	42	59	Right-handed alpha
Helix 87	AJ6	C	67	78	Right-handed alpha
Helix 88	AJ7	C	79	82	Right-handed 310
Helix 89	AJ8	C	100	110	Right-handed alpha
Helix 90	AJ9	C	125	130	Right-handed alpha
Helix 91	AK1	C	131	143	Right-handed alpha
Helix 92	AK2	C	168	175	Right-handed alpha
Helix 93	AK3	C	178	188	Right-handed alpha
Helix 94	AK4	C	214	226	Right-handed alpha
Helix 95	AK5	C	255	261	Right-handed alpha
Helix 96	AK6	C	274	283	Right-handed alpha
Helix 97	AK7	C	283	301	Right-handed alpha
Helix 98	AK8	C	307	318	Right-handed alpha
Helix 99	AK9	C	338	346	Right-handed alpha
Helix 100	AL1	C	349	359	Right-handed alpha
Helix 101	AL2	C	367	374	Right-handed alpha
Helix 102	AL3	C	379	383	Right-handed 310
Helix 103	AL4	D	21	35	Right-handed alpha
Helix 104	AL5	D	54	64	Right-handed alpha
Helix 105	AL6	D	71	76	Right-handed alpha
Helix 106	AL7	D	78	82	Right-handed 310
Helix 107	AL8	D	110	114	Right-handed 310
Helix 108	AL9	D	153	157	Right-handed 310
Helix 109	AM1	D	177	183	Right-handed alpha
Helix 110	AM2	D	207	212	Right-handed 310
Helix 111	AM3	D	237	262	Right-handed alpha
Helix 112	AM4	E	14	18	Right-handed 310
Helix 113	AM5	E	21	35	Right-handed alpha
Helix 114	AM6	E	109	113	Right-handed 310
Helix 115	AM7	E	122	126	Right-handed 310
Helix 116	AM8	E	171	182	Right-handed alpha
Helix 117	AM9	F	14	30	Right-handed alpha
Helix 118	AN1	F	32	46	Right-handed alpha
Helix 119	AN2	F	49	60	Right-handed alpha
Helix 120	AN3	F	66	77	Right-handed alpha
Helix 121	AN4	F	83	88	Right-handed alpha
Helix 122	AN5	F	97	109	Right-handed alpha
Helix 123	AN6	H	24	36	Right-handed alpha
Helix 124	AN7	H	38	42	Right-handed 310
Helix 125	AN8	H	49	56	Right-handed alpha
Helix 126	AN9	K	4	14	Right-handed alpha
Helix 127	AO1	K	19	35	Right-handed alpha
Helix 128	AO2	K	51	62	Right-handed alpha
Helix 129	AO3	L	21	33	Right-handed alpha
Helix 130	AO4	L	64	88	Right-handed alpha
Helix 131	AO5	N	14	16	Right-handed 310
Helix 132	AO6	N	17	26	Right-handed alpha
Helix 133	AO7	N	30	39	Right-handed alpha
Helix 134	AO8	N	42	51	Right-handed alpha
Helix 135	AO9	N	55	60	Right-handed alpha
Helix 136	AP1	Q	37	58	Right-handed alpha
Helix 137	AP2	Q	62	77	Right-handed alpha

There are 46 sheets in PDB entry 7OQY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1111	1116	first strand
Strand 2	A	4	10	anti-parallel
Strand 3	C	361	362	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	82	first strand
Strand 2	A	208	214	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	159	first strand
Strand 2	A	163	166	anti-parallel
Strand 3	A	173	174	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	318	first strand
Strand 2	B	1025	1027	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1001	1003	first strand
Strand 2	A	321	328	anti-parallel
Strand 3	A	461	465	anti-parallel
Strand 4	A	416	420	anti-parallel
Strand 5	A	430	437	anti-parallel
Strand 6	A	336	339	parallel
Strand 7	A	443	445	anti-parallel
Strand 8	A	321	328	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	352	first strand
Strand 2	A	406	410	anti-parallel
Strand 3	A	375	379	anti-parallel
Strand 4	A	385	387	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	487	488	first strand
Strand 2	A	493	494	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	515	516	first strand
Strand 2	A	546	547	anti-parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	539	541	first strand
Strand 2	G	68	79	anti-parallel
Strand 3	G	114	122	anti-parallel
Strand 4	G	51	57	anti-parallel
Strand 5	G	5	15	anti-parallel
Strand 6	G	23	29	anti-parallel
Strand 7	G	34	39	anti-parallel
Strand 8	G	94	100	anti-parallel
Strand 9	G	85	91	anti-parallel
Strand 10	G	68	79	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	562	565	first strand
Strand 2	A	585	588	anti-parallel
Strand 3	A	593	595	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	748	749	first strand
Strand 2	A	781	782	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	830	832	first strand
Strand 2	A	838	840	anti-parallel
Strand 3	A	845	847	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	47	first strand
Strand 2	B	53	62	anti-parallel
Strand 3	B	91	102	anti-parallel
Strand 4	B	110	118	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	76	77	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	152	first strand
Strand 2	B	155	159	anti-parallel
Strand 3	B	409	411	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	342	first strand
Strand 2	B	161	165	anti-parallel
Strand 3	B	426	429	parallel
Strand 4	B	465	467	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	174	first strand
Strand 2	B	181	190	anti-parallel
Strand 3	B	195	203	anti-parallel
Strand 4	B	208	212	anti-parallel
Strand 5	B	219	220	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	573	581	anti-parallel
Strand 3	B	611	614	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	584	585	first strand
Strand 2	B	573	581	anti-parallel
Strand 3	B	637	638	anti-parallel
Strand 4	B	624	625	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	523	528	first strand
Strand 2	B	516	520	anti-parallel
Strand 3	B	562	567	parallel
Strand 4	B	552	557	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	689	693	first strand
Strand 2	B	750	757	anti-parallel
Strand 3	B	858	868	anti-parallel
Strand 4	B	843	852	anti-parallel
Strand 5	B	801	802	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	689	693	first strand
Strand 2	B	750	757	anti-parallel
Strand 3	B	858	868	anti-parallel
Strand 4	B	843	852	anti-parallel
Strand 5	P	33	36	anti-parallel
Strand 6	P	3	6	anti-parallel
Strand 7	P	14	16	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	701	702	first strand
Strand 2	B	938	939	parallel

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There are 8 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	966	967	first strand
Strand 2	B	982	991	anti-parallel
Strand 3	B	875	878	anti-parallel
Strand 4	B	883	890	anti-parallel
Strand 5	B	735	739	parallel
Strand 6	B	906	908	anti-parallel
Strand 7	B	718	724	parallel
Strand 8	B	982	991	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	771	772	first strand
Strand 2	B	811	813	anti-parallel
Strand 3	B	831	832	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	807	809	first strand
Strand 2	B	835	836	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	897	898	first strand
Strand 2	B	969	970	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1054	1060	first strand
Strand 2	B	1087	1093	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1068	1069	first strand
Strand 2	B	1076	1077	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	272	first strand
Strand 2	C	120	122	anti-parallel
Strand 3	C	247	251	anti-parallel
Strand 4	C	238	242	anti-parallel
Strand 5	Y	48	49	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	146	first strand
Strand 2	C	228	230	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	196	200	first strand
Strand 2	C	203	206	anti-parallel
Strand 3	C	162	167	anti-parallel
Strand 4	C	151	157	anti-parallel
Strand 5	Y	34	38	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	57	59	first strand
Strand 2	C	386	388	anti-parallel
Strand 3	K	67	72	anti-parallel
Strand 4	K	78	82	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	9	first strand
Strand 2	D	12	18	anti-parallel
Strand 3	D	217	232	anti-parallel
Strand 4	D	159	172	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	115	116	first strand
Strand 2	D	94	101	anti-parallel
Strand 3	D	138	148	anti-parallel
Strand 4	D	38	49	anti-parallel
Strand 5	P	43	46	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	109	first strand
Strand 2	D	131	133	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	188	190	first strand
Strand 2	D	195	197	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	4	first strand
Strand 2	F	11	13	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	48	53	first strand
Strand 2	E	66	74	anti-parallel
Strand 3	E	6	13	anti-parallel
Strand 4	F	6	7	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	39	first strand
Strand 2	E	43	44	anti-parallel

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There are 7 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	170	first strand
Strand 2	E	141	149	anti-parallel
Strand 3	E	159	162	anti-parallel
Strand 4	E	104	108	parallel
Strand 5	E	97	101	anti-parallel
Strand 6	E	84	92	anti-parallel
Strand 7	E	141	149	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	119	first strand
Strand 2	E	127	129	anti-parallel
Strand 3	E	135	136	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	19	22	first strand
Strand 2	H	62	69	anti-parallel
Strand 3	H	73	82	anti-parallel
Strand 4	H	44	46	parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2	8	first strand
Strand 2	L	12	18	anti-parallel
Strand 3	L	52	59	anti-parallel
Strand 4	L	38	44	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	12	14	first strand
Strand 2	Y	17	19	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	53	55	first strand
Strand 2	Y	58	60	anti-parallel
Strand 3	Y	70	75	anti-parallel
Strand 4	Y	80	83	anti-parallel
Strand 5	Y	89	91	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 7OQY

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OQY