Analysis of interatomic Contacts of Structural Units in PDB entry:
7OSE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OSE entry

There are 6 chains in PDB entry 7OSE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 2MET 504
B
 PHE 2TYR 378
C
 MET 1LEU 28
D
 TRP 2MET 504
E
 PHE 2TYR 378
F
 MET 1LEU 28
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 7OSE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 21Right-handed alpha
Helix 2
AA2
A
22 44Right-handed alpha
Helix 3
AA3
A
46 81Right-handed alpha
Helix 4
AA4
A
81 117Right-handed alpha
Helix 5
AA5
A
122 153Right-handed alpha
Helix 6
AA6
A
170 176Right-handed alpha
Helix 7
AA7
A
177 209Right-handed alpha
Helix 8
AA8
A
214 249Right-handed alpha
Helix 9
AA9
A
249 258Right-handed alpha
Helix 10
AB1
A
291 298Right-handed alpha
Helix 11
AB2
A
306 333Right-handed alpha
Helix 12
AB3
A
337 346Right-handed alpha
Helix 13
AB4
A
350 361Right-handed alpha
Helix 14
AB5
A
368 379Right-handed alpha
Helix 15
AB6
A
382 413Right-handed alpha
Helix 16
AB7
A
419 429Right-handed alpha
Helix 17
AB8
A
430 448Right-handed alpha
Helix 18
AB9
A
467 500Right-handed alpha
Helix 19
AC1
B
3 40Right-handed alpha
Helix 20
AC2
B
42 53Right-handed alpha
Helix 21
AC3
B
56 75Right-handed alpha
Helix 22
AC4
B
75 86Right-handed alpha
Helix 23
AC5
B
86 107Right-handed alpha
Helix 24
AC6
B
108 110Right-handed 310
Helix 25
AC7
B
112 144Right-handed alpha
Helix 26
AC8
B
161 165Right-handed 310
Helix 27
AC9
B
166 192Right-handed alpha
Helix 28
AD1
B
194 225Right-handed alpha
Helix 29
AD2
B
255 261Right-handed alpha
Helix 30
AD3
B
262 264Right-handed 310
Helix 31
AD4
B
265 285Right-handed alpha
Helix 32
AD5
B
286 309Right-handed alpha
Helix 33
AD6
B
332 361Right-handed alpha
Helix 34
AD7
B
366 373Right-handed alpha
Helix 35
AD8
C
2 25Right-handed alpha
Helix 36
AD9
D
3 21Right-handed alpha
Helix 37
AE1
D
22 44Right-handed alpha
Helix 38
AE2
D
46 81Right-handed alpha
Helix 39
AE3
D
81 117Right-handed alpha
Helix 40
AE4
D
122 153Right-handed alpha
Helix 41
AE5
D
170 176Right-handed alpha
Helix 42
AE6
D
177 209Right-handed alpha
Helix 43
AE7
D
214 249Right-handed alpha
Helix 44
AE8
D
249 258Right-handed alpha
Helix 45
AE9
D
291 298Right-handed alpha
Helix 46
AF1
D
306 333Right-handed alpha
Helix 47
AF2
D
337 346Right-handed alpha
Helix 48
AF3
D
350 361Right-handed alpha
Helix 49
AF4
D
368 379Right-handed alpha
Helix 50
AF5
D
382 413Right-handed alpha
Helix 51
AF6
D
419 429Right-handed alpha
Helix 52
AF7
D
430 448Right-handed alpha
Helix 53
AF8
D
467 500Right-handed alpha
Helix 54
AF9
E
3 40Right-handed alpha
Helix 55
AG1
E
42 53Right-handed alpha
Helix 56
AG2
E
56 75Right-handed alpha
Helix 57
AG3
E
75 86Right-handed alpha
Helix 58
AG4
E
86 107Right-handed alpha
Helix 59
AG5
E
108 110Right-handed 310
Helix 60
AG6
E
112 144Right-handed alpha
Helix 61
AG7
E
161 165Right-handed 310
Helix 62
AG8
E
166 192Right-handed alpha
Helix 63
AG9
E
194 225Right-handed alpha
Helix 64
AH1
E
255 261Right-handed alpha
Helix 65
AH2
E
262 264Right-handed 310
Helix 66
AH3
E
265 285Right-handed alpha
Helix 67
AH4
E
286 309Right-handed alpha
Helix 68
AH5
E
332 361Right-handed alpha
Helix 69
AH6
E
366 373Right-handed alpha
Helix 70
AH7
F
2 25Right-handed alpha
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There are 8 sheets in PDB entry 7OSE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 160first strand
Strand 2
A
165 168anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 272first strand
Strand 2
A
286 288anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 149first strand
Strand 2
B
155 157anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 233first strand
Strand 2
B
246 251anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
157 160first strand
Strand 2
D
165 168anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
269 272first strand
Strand 2
D
286 288anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 149first strand
Strand 2
E
155 157anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
227 233first strand
Strand 2
E
246 251anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il