Analysis of interatomic Contacts of Structural Units in PDB entry:
7OSJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7OSJ entry

There are 6 chains in PDB entry 7OSJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 28	THR 429
B	MET 1	LEU 308
C	ASN 2	LEU 308
D	ASN 2	ARG 274
E	ASN 2	ARG 274
H	CYS 24	GLY 174

There are 62 helices in PDB entry 7OSJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	34	Right-handed 310
Helix 2	AA2	A	375	383	Right-handed alpha
Helix 3	AA3	A	384	388	Right-handed 310
Helix 4	AA4	A	392	405	Right-handed alpha
Helix 5	AA5	B	40	50	Right-handed alpha
Helix 6	AA6	B	69	74	Right-handed alpha
Helix 7	AA7	B	90	103	Right-handed alpha
Helix 8	AA8	B	105	107	Right-handed 310
Helix 9	AA9	B	108	116	Right-handed alpha
Helix 10	AB1	B	130	141	Right-handed alpha
Helix 11	AB2	B	160	178	Right-handed alpha
Helix 12	AB3	B	187	192	Right-handed alpha
Helix 13	AB4	B	211	219	Right-handed alpha
Helix 14	AB5	B	232	238	Right-handed alpha
Helix 15	AB6	B	238	243	Right-handed alpha
Helix 16	AB7	B	263	275	Right-handed alpha
Helix 17	AB8	B	286	298	Right-handed alpha
Helix 18	AB9	C	40	51	Right-handed alpha
Helix 19	AC1	C	69	74	Right-handed alpha
Helix 20	AC2	C	90	102	Right-handed alpha
Helix 21	AC3	C	105	109	Right-handed 310
Helix 22	AC4	C	125	129	Right-handed 310
Helix 23	AC5	C	130	141	Right-handed alpha
Helix 24	AC6	C	160	177	Right-handed alpha
Helix 25	AC7	C	212	218	Right-handed alpha
Helix 26	AC8	C	234	238	Right-handed 310
Helix 27	AC9	C	240	244	Right-handed 310
Helix 28	AD1	C	263	274	Right-handed alpha
Helix 29	AD2	C	286	299	Right-handed alpha
Helix 30	AD3	D	3	16	Right-handed alpha
Helix 31	AD4	D	18	42	Right-handed alpha
Helix 32	AD5	D	51	75	Right-handed alpha
Helix 33	AD6	D	78	83	Right-handed alpha
Helix 34	AD7	D	85	91	Right-handed alpha
Helix 35	AD8	D	98	129	Right-handed alpha
Helix 36	AD9	D	135	168	Right-handed alpha
Helix 37	AE1	D	170	188	Right-handed alpha
Helix 38	AE2	D	188	200	Right-handed alpha
Helix 39	AE3	D	208	215	Right-handed 310
Helix 40	AE4	D	216	226	Right-handed alpha
Helix 41	AE5	D	236	244	Right-handed 310
Helix 42	AE6	D	248	273	Right-handed alpha
Helix 43	AE7	E	3	7	Right-handed alpha
Helix 44	AE8	E	7	16	Right-handed alpha
Helix 45	AE9	E	18	38	Right-handed alpha
Helix 46	AF1	E	52	75	Right-handed alpha
Helix 47	AF2	E	78	84	Right-handed alpha
Helix 48	AF3	E	85	91	Right-handed alpha
Helix 49	AF4	E	96	120	Right-handed alpha
Helix 50	AF5	E	122	129	Right-handed alpha
Helix 51	AF6	E	135	143	Right-handed alpha
Helix 52	AF7	E	143	168	Right-handed alpha
Helix 53	AF8	E	170	188	Right-handed alpha
Helix 54	AF9	E	190	199	Right-handed alpha
Helix 55	AG1	E	208	213	Right-handed alpha
Helix 56	AG2	E	216	224	Right-handed alpha
Helix 57	AG3	E	248	272	Right-handed alpha
Helix 58	AG4	H	25	34	Right-handed alpha
Helix 59	AG5	H	51	55	Right-handed 310
Helix 60	AG6	H	73	82	Right-handed alpha
Helix 61	AG7	H	139	150	Right-handed alpha
Helix 62	AG8	H	160	172	Right-handed alpha

There are 13 sheets in PDB entry 7OSJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	65	66	parallel

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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	58	first strand
Strand 2	A	81	83	parallel
Strand 3	A	107	111	parallel
Strand 4	A	130	135	parallel
Strand 5	A	162	165	parallel
Strand 6	A	184	187	parallel
Strand 7	A	204	209	parallel
Strand 8	A	226	231	parallel
Strand 9	A	252	254	parallel
Strand 10	A	289	291	parallel
Strand 11	A	308	312	parallel
Strand 12	A	331	334	parallel

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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	73	first strand
Strand 2	A	94	96	parallel
Strand 3	A	124	126	parallel
Strand 4	A	146	148	parallel
Strand 5	A	176	178	parallel
Strand 6	A	198	200	parallel
Strand 7	A	220	222	parallel
Strand 8	A	242	244	parallel
Strand 9	A	265	267	parallel
Strand 10	A	302	304	parallel
Strand 11	A	325	327	parallel
Strand 12	A	351	352	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	91	first strand
Strand 2	A	119	121	parallel
Strand 3	A	141	143	parallel
Strand 4	A	171	173	parallel
Strand 5	A	193	195	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	217	first strand
Strand 2	A	237	239	parallel
Strand 3	A	259	262	parallel
Strand 4	A	296	299	parallel
Strand 5	A	321	322	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	25	first strand
Strand 2	B	4	11	anti-parallel
Strand 3	B	59	62	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	79	first strand
Strand 2	B	149	153	parallel
Strand 3	B	180	184	parallel
Strand 4	B	32	35	parallel
Strand 5	B	197	200	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	248	first strand
Strand 2	B	255	259	anti-parallel
Strand 3	B	223	227	anti-parallel
Strand 4	B	280	283	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	59	62	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	79	first strand
Strand 2	C	149	153	parallel
Strand 3	C	180	184	parallel
Strand 4	C	31	35	parallel
Strand 5	C	197	202	parallel
Strand 6	C	205	211	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	246	249	first strand
Strand 2	C	255	258	anti-parallel
Strand 3	C	224	228	anti-parallel
Strand 4	C	279	283	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	69	70	first strand
Strand 2	H	61	63	anti-parallel
Strand 3	H	92	94	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	119	120	first strand
Strand 2	H	153	154	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7OSJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7OSJ