Analysis of interatomic Contacts of Structural Units in PDB entry:
7OSK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OSK entry

There are 2 chains in PDB entry 7OSK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 37GLU 396
B
 PRO 37GLU 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 7OSK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 66Right-handed alpha
Helix 2
AA2
A
78 86Right-handed alpha
Helix 3
AA3
A
113 127Right-handed alpha
Helix 4
AA4
A
157 179Right-handed alpha
Helix 5
AA5
A
205 224Right-handed alpha
Helix 6
AA6
A
237 251Right-handed alpha
Helix 7
AA7
A
263 268Right-handed alpha
Helix 8
AA8
A
269 284Right-handed alpha
Helix 9
AA9
A
311 319Right-handed alpha
Helix 10
AB1
A
323 343Right-handed alpha
Helix 11
AB2
A
372 376Right-handed 310
Helix 12
AB3
A
385 388Right-handed 310
Helix 13
AB4
A
389 394Right-handed alpha
Helix 14
AB5
B
58 65Right-handed alpha
Helix 15
AB6
B
78 86Right-handed alpha
Helix 16
AB7
B
113 126Right-handed alpha
Helix 17
AB8
B
150 154Right-handed 310
Helix 18
AB9
B
157 178Right-handed alpha
Helix 19
AC1
B
205 224Right-handed alpha
Helix 20
AC2
B
237 252Right-handed alpha
Helix 21
AC3
B
263 268Right-handed alpha
Helix 22
AC4
B
269 282Right-handed alpha
Helix 23
AC5
B
312 319Right-handed alpha
Helix 24
AC6
B
323 343Right-handed alpha
Helix 25
AC7
B
372 376Right-handed 310
Helix 26
AC8
B
385 388Right-handed 310
Helix 27
AC9
B
389 394Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7OSK. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
90 95parallel
Strand 3
A
130 135parallel
Strand 4
A
185 188parallel
Strand 5
A
228 234parallel
Strand 6
A
257 261parallel
Strand 7
A
287 293parallel
Strand 8
A
346 351parallel
Strand 9
A
51 55parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 55first strand
Strand 2
B
90 95parallel
Strand 3
B
130 135parallel
Strand 4
B
185 188parallel
Strand 5
B
228 234parallel
Strand 6
B
257 261parallel
Strand 7
B
287 292parallel
Strand 8
B
346 351parallel
Strand 9
B
51 55parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il