Analysis of interatomic Contacts of Structural Units in PDB entry:
7OT8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OT8 entry

There are 2 chains in PDB entry 7OT8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4THR 185
B
 TRP 7ALA 184
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7OT8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 16Right-handed alpha
Helix 2
AA2
A
27 37Right-handed alpha
Helix 3
AA3
A
52 62Right-handed alpha
Helix 4
AA4
A
73 84Right-handed alpha
Helix 5
AA5
A
98 100Right-handed 310
Helix 6
AA6
A
101 108Right-handed alpha
Helix 7
AA7
A
119 129Right-handed alpha
Helix 8
AA8
A
140 155Right-handed alpha
Helix 9
AA9
A
165 176Right-handed alpha
Helix 10
AB1
B
10 17Right-handed alpha
Helix 11
AB2
B
27 37Right-handed alpha
Helix 12
AB3
B
48 62Right-handed alpha
Helix 13
AB4
B
73 82Right-handed alpha
Helix 14
AB5
B
98 108Right-handed alpha
Helix 15
AB6
B
119 129Right-handed alpha
Helix 16
AB7
B
144 154Right-handed alpha
Helix 17
AB8
B
165 175Right-handed alpha
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There are 2 sheets in PDB entry 7OT8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 25first strand
Strand 2
A
41 44parallel
Strand 3
A
67 70parallel
Strand 4
A
87 91parallel
Strand 5
A
112 117parallel
Strand 6
A
133 136parallel
Strand 7
A
159 163parallel
Strand 8
A
179 183parallel
Strand 9
A
21 25parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 25first strand
Strand 2
B
41 44parallel
Strand 3
B
67 71parallel
Strand 4
B
87 91parallel
Strand 5
B
113 117parallel
Strand 6
B
133 136parallel
Strand 7
B
159 162parallel
Strand 8
B
179 183parallel
Strand 9
B
20 25parallel
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