Analysis of interatomic Contacts of Structural Units in PDB entry:
7OTM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OTM entry

There is 1 chain in PDB entry 7OTM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 9UNK 6020
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are214 helices in PDB entry 7OTM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 23Right-handed alpha
Helix 2
AA2
A
33 45Right-handed alpha
Helix 3
AA3
A
49 52Right-handed 310
Helix 4
AA4
A
53 71Right-handed alpha
Helix 5
AA5
A
78 97Right-handed alpha
Helix 6
AA6
A
103 115Right-handed alpha
Helix 7
AA7
A
116 118Right-handed 310
Helix 8
AA8
A
127 127Right-handed 310
Helix 9
AA9
A
128 146Right-handed alpha
Helix 10
AB1
A
153 163Right-handed alpha
Helix 11
AB2
A
173 178Right-handed alpha
Helix 12
AB3
A
178 185Right-handed alpha
Helix 13
AB4
A
191 207Right-handed alpha
Helix 14
AB5
A
218 232Right-handed alpha
Helix 15
AB6
A
242 255Right-handed alpha
Helix 16
AB7
A
257 262Right-handed alpha
Helix 17
AB8
A
266 278Right-handed alpha
Helix 18
AB9
A
284 288Right-handed 310
Helix 19
AC1
A
289 303Right-handed alpha
Helix 20
AC2
A
308 330Right-handed alpha
Helix 21
AC3
A
334 351Right-handed alpha
Helix 22
AC4
A
358 369Right-handed alpha
Helix 23
AC5
A
369 377Right-handed alpha
Helix 24
AC6
A
380 394Right-handed alpha
Helix 25
AC7
A
406 408Right-handed 310
Helix 26
AC8
A
409 422Right-handed alpha
Helix 27
AC9
A
431 445Right-handed alpha
Helix 28
AD1
A
453 469Right-handed alpha
Helix 29
AD2
A
471 493Right-handed alpha
Helix 30
AD3
A
524 536Right-handed alpha
Helix 31
AD4
A
539 545Right-handed alpha
Helix 32
AD5
A
559 579Right-handed alpha
Helix 33
AD6
A
616 634Right-handed alpha
Helix 34
AD7
A
642 644Right-handed 310
Helix 35
AD8
A
645 660Right-handed alpha
Helix 36
AD9
A
664 679Right-handed alpha
Helix 37
AE1
A
698 718Right-handed alpha
Helix 38
AE2
A
719 721Right-handed 310
Helix 39
AE3
A
724 734Right-handed alpha
Helix 40
AE4
A
737 742Right-handed alpha
Helix 41
AE5
A
744 759Right-handed alpha
Helix 42
AE6
A
762 780Right-handed alpha
Helix 43
AE7
A
781 786Right-handed alpha
Helix 44
AE8
A
788 793Right-handed alpha
Helix 45
AE9
A
796 802Right-handed alpha
Helix 46
AF1
A
848 862Right-handed alpha
Helix 47
AF2
A
866 871Right-handed 310
Helix 48
AF3
A
872 877Right-handed alpha
Helix 49
AF4
A
880 884Right-handed 310
Helix 50
AF5
A
910 921Right-handed alpha
Helix 51
AF6
A
925 946Right-handed alpha
Helix 52
AF7
A
958 974Right-handed alpha
Helix 53
AF8
A
977 996Right-handed alpha
Helix 54
AF9
A
1002 1006Right-handed 310
Helix 55
AG1
A
1007 1016Right-handed alpha
Helix 56
AG2
A
1023 1044Right-handed alpha
Helix 57
AG3
A
1045 1050Right-handed alpha
Helix 58
AG4
A
1055 1068Right-handed alpha
Helix 59
AG5
A
1072 1086Right-handed alpha
Helix 60
AG6
A
1092 1114Right-handed alpha
Helix 61
AG7
A
1115 1117Right-handed 310
Helix 62
AG8
A
1122 1146Right-handed alpha
Helix 63
AG9
A
1164 1175Right-handed alpha
Helix 64
AH1
A
1180 1195Right-handed alpha
Helix 65
AH2
A
1196 1198Right-handed 310
Helix 66
AH3
A
1203 1215Right-handed alpha
Helix 67
AH4
A
1216 1226Right-handed alpha
Helix 68
AH5
A
1233 1238Right-handed alpha
Helix 69
AH6
A
1251 1273Right-handed alpha
Helix 70
AH7
A
1277 1282Right-handed alpha
Helix 71
AH8
A
1288 1298Right-handed alpha
Helix 72
AH9
A
1323 1325Right-handed 310
Helix 73
AI1
A
1326 1351Right-handed alpha
Helix 74
AI2
A
1354 1361Right-handed alpha
Helix 75
AI3
A
1364 1378Right-handed alpha
Helix 76
AI4
A
1378 1383Right-handed alpha
Helix 77
AI5
A
1390 1409Right-handed alpha
Helix 78
AI6
A
1411 1421Right-handed alpha
Helix 79
AI7
A
1424 1435Right-handed alpha
Helix 80
AI8
A
1441 1462Right-handed alpha
Helix 81
AI9
A
1463 1468Right-handed alpha
Helix 82
AJ1
A
1476 1487Right-handed alpha
Helix 83
AJ2
A
1506 1520Right-handed alpha
Helix 84
AJ3
A
1524 1533Right-handed alpha
Helix 85
AJ4
A
1554 1563Right-handed alpha
Helix 86
AJ5
A
1563 1574Right-handed alpha
Helix 87
AJ6
A
1574 1585Right-handed alpha
Helix 88
AJ7
A
1591 1607Right-handed alpha
Helix 89
AJ8
A
1611 1626Right-handed alpha
Helix 90
AJ9
A
1627 1633Right-handed 310
Helix 91
AK1
A
1638 1656Right-handed alpha
Helix 92
AK2
A
1667 1680Right-handed alpha
Helix 93
AK3
A
1685 1693Right-handed alpha
Helix 94
AK4
A
1694 1699Right-handed 310
Helix 95
AK5
A
1706 1722Right-handed alpha
Helix 96
AK6
A
1733 1754Right-handed alpha
Helix 97
AK7
A
1755 1767Right-handed alpha
Helix 98
AK8
A
1774 1786Right-handed alpha
Helix 99
AK9
A
1790 1806Right-handed alpha
Helix 100
AL1
A
1812 1823Right-handed alpha
Helix 101
AL2
A
1823 1829Right-handed alpha
Helix 102
AL3
A
1834 1853Right-handed alpha
Helix 103
AL4
A
1862 1882Right-handed alpha
Helix 104
AL5
A
1885 1890Right-handed alpha
Helix 105
AL6
A
1910 1921Right-handed alpha
Helix 106
AL7
A
1934 1956Right-handed alpha
Helix 107
AL8
A
2093 2107Right-handed alpha
Helix 108
AL9
A
2123 2135Right-handed alpha
Helix 109
AM1
A
2139 2153Right-handed alpha
Helix 110
AM2
A
2160 2172Right-handed alpha
Helix 111
AM3
A
2183 2196Right-handed alpha
Helix 112
AM4
A
2205 2222Right-handed alpha
Helix 113
AM5
A
2227 2245Right-handed alpha
Helix 114
AM6
A
2254 2261Right-handed alpha
Helix 115
AM7
A
2267 2269Right-handed 310
Helix 116
AM8
A
2270 2283Right-handed alpha
Helix 117
AM9
A
2296 2305Right-handed alpha
Helix 118
AN1
A
2306 2309Right-handed 310
Helix 119
AN2
A
2312 2333Right-handed alpha
Helix 120
AN3
A
2338 2352Right-handed alpha
Helix 121
AN4
A
2357 2369Right-handed alpha
Helix 122
AN5
A
2371 2377Right-handed 310
Helix 123
AN6
A
2378 2386Right-handed alpha
Helix 124
AN7
A
2391 2404Right-handed alpha
Helix 125
AN8
A
2412 2418Right-handed alpha
Helix 126
AN9
A
2419 2425Right-handed alpha
Helix 127
AO1
A
2428 2443Right-handed alpha
Helix 128
AO2
A
2444 2446Right-handed 310
Helix 129
AO3
A
2447 2456Right-handed alpha
Helix 130
AO4
A
2457 2462Right-handed 310
Helix 131
AO5
A
2469 2484Right-handed alpha
Helix 132
AO6
A
2496 2509Right-handed alpha
Helix 133
AO7
A
2510 2512Right-handed 310
Helix 134
AO8
A
2514 2526Right-handed alpha
Helix 135
AO9
A
2534 2542Right-handed alpha
Helix 136
AP1
A
2543 2546Right-handed 310
Helix 137
AP2
A
2557 2564Right-handed alpha
Helix 138
AP3
A
2565 2569Right-handed 310
Helix 139
AP4
A
2787 2799Right-handed alpha
Helix 140
AP5
A
2801 2820Right-handed alpha
Helix 141
AP6
A
2821 2823Right-handed 310
Helix 142
AP7
A
2825 2846Right-handed alpha
Helix 143
AP8
A
2851 2864Right-handed alpha
Helix 144
AP9
A
2867 2871Right-handed 310
Helix 145
AQ1
A
2872 2883Right-handed alpha
Helix 146
AQ2
A
2885 2899Right-handed alpha
Helix 147
AQ3
A
2917 2934Right-handed alpha
Helix 148
AQ4
A
2935 2946Right-handed alpha
Helix 149
AQ5
A
2951 2962Right-handed alpha
Helix 150
AQ6
A
2964 2977Right-handed alpha
Helix 151
AQ7
A
2987 3005Right-handed alpha
Helix 152
AQ8
A
3007 3013Right-handed alpha
Helix 153
AQ9
A
3026 3031Right-handed alpha
Helix 154
AR1
A
3040 3054Right-handed alpha
Helix 155
AR2
A
3059 3071Right-handed alpha
Helix 156
AR3
A
3074 3081Right-handed alpha
Helix 157
AR4
A
3082 3094Right-handed alpha
Helix 158
AR5
A
3095 3116Right-handed alpha
Helix 159
AR6
A
3121 3131Right-handed alpha
Helix 160
AR7
A
3132 3146Right-handed alpha
Helix 161
AR8
A
3153 3167Right-handed alpha
Helix 162
AR9
A
3175 3194Right-handed alpha
Helix 163
AS1
A
3195 3197Right-handed 310
Helix 164
AS2
A
3230 3249Right-handed alpha
Helix 165
AS3
A
3253 3262Right-handed alpha
Helix 166
AS4
A
3271 3287Right-handed alpha
Helix 167
AS5
A
3290 3307Right-handed alpha
Helix 168
AS6
A
3322 3344Right-handed alpha
Helix 169
AS7
A
3345 3352Right-handed 310
Helix 170
AS8
A
3353 3356Right-handed 310
Helix 171
AS9
A
3357 3364Right-handed alpha
Helix 172
AT1
A
3369 3394Right-handed alpha
Helix 173
AT2
A
3406 3429Right-handed alpha
Helix 174
AT3
A
3441 3455Right-handed alpha
Helix 175
AT4
A
3458 3463Right-handed alpha
Helix 176
AT5
A
3465 3472Right-handed alpha
Helix 177
AT6
A
3475 3479Right-handed 310
Helix 178
AT7
A
3480 3489Right-handed alpha
Helix 179
AT8
A
3498 3503Right-handed alpha
Helix 180
AT9
A
3514 3525Right-handed alpha
Helix 181
AU1
A
3529 3538Right-handed alpha
Helix 182
AU2
A
3548 3563Right-handed alpha
Helix 183
AU3
A
3566 3576Right-handed alpha
Helix 184
AU4
A
3580 3594Right-handed alpha
Helix 185
AU5
A
3605 3607Right-handed 310
Helix 186
AU6
A
3608 3615Right-handed alpha
Helix 187
AU7
A
3626 3636Right-handed alpha
Helix 188
AU8
A
3639 3644Right-handed alpha
Helix 189
AU9
A
3657 3671Right-handed alpha
Helix 190
AV1
A
3686 3690Right-handed 310
Helix 191
AV2
A
3758 3778Right-handed alpha
Helix 192
AV3
A
3779 3784Right-handed alpha
Helix 193
AV4
A
3812 3820Right-handed alpha
Helix 194
AV5
A
3821 3830Right-handed alpha
Helix 195
AV6
A
3834 3847Right-handed alpha
Helix 196
AV7
A
3853 3862Right-handed alpha
Helix 197
AV8
A
3863 3878Right-handed alpha
Helix 198
AV9
A
3882 3890Right-handed alpha
Helix 199
AW1
A
3893 3919Right-handed alpha
Helix 200
AW2
A
3924 3926Right-handed 310
Helix 201
AW3
A
3947 3952Right-handed alpha
Helix 202
AW4
A
3964 3970Right-handed alpha
Helix 203
AW5
A
3978 3994Right-handed alpha
Helix 204
AW6
A
3994 4007Right-handed alpha
Helix 205
AW7
A
4012 4022Right-handed alpha
Helix 206
AW8
A
4040 4050Right-handed alpha
Helix 207
AW9
A
4051 4053Right-handed 310
Helix 208
AX1
A
4055 4068Right-handed alpha
Helix 209
AX2
A
4073 4083Right-handed alpha
Helix 210
AX3
A
4099 4113Right-handed alpha
Helix 211
AX4
A
4113 4118Right-handed alpha
Helix 212
AX5
A
4119 4120Right-handed 310
Helix 213
AX6
A
4121 4125Right-handed 310
Helix 214
AX7
A
6002 6016Right-handed alpha
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There are 5 sheets in PDB entry 7OTM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
583 585first strand
Strand 2
A
612 614anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
893 895first strand
Strand 2
A
904 906anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3719 3722first strand
Strand 2
A
3739 3742anti-parallel
Strand 3
A
3746 3749anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3727 3728first strand
Strand 2
A
3736 3737anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3809 3811first strand
Strand 2
A
3928 3931anti-parallel
Strand 3
A
3937 3939anti-parallel
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