Analysis of interatomic Contacts of Structural Units in PDB entry:
7OTR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OTR entry

There is 1 chain in PDB entry 7OTR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP -3HIS 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7OTR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 14Right-handed alpha
Helix 2
AA2
A
22 31Right-handed alpha
Helix 3
AA3
A
44 52Right-handed alpha
Helix 4
AA4
A
59 62Right-handed 310
Helix 5
AA5
A
99 105Right-handed alpha
Helix 6
AA6
A
109 113Right-handed 310
Helix 7
AA7
A
127 134Right-handed alpha
Helix 8
AA8
A
142 150Right-handed alpha
Helix 9
AA9
A
151 165Right-handed alpha
Helix 10
AB1
A
169 180Right-handed alpha
Helix 11
AB2
A
181 186Right-handed 310
Helix 12
AB3
A
187 201Right-handed alpha
Helix 13
AB4
A
203 214Right-handed alpha
Helix 14
AB5
A
215 220Right-handed alpha
Helix 15
AB6
A
222 227Right-handed 310
Helix 16
AB7
A
238 250Right-handed alpha
Helix 17
AB8
A
253 261Right-handed 310
Helix 18
AB9
A
263 279Right-handed alpha
Helix 19
AC1
A
283 290Right-handed alpha
Helix 20
AC2
A
291 302Right-handed alpha
Helix 21
AC3
A
307 314Right-handed alpha
Helix 22
AC4
A
319 323Right-handed 310
Helix 23
AC5
A
326 335Right-handed alpha
Helix 24
AC6
A
340 355Right-handed alpha
Helix 25
AC7
A
361 378Right-handed alpha
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There are 3 sheets in PDB entry 7OTR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
64 69anti-parallel
Strand 3
A
72 78anti-parallel
Strand 4
A
38 41parallel
Strand 5
A
18 21anti-parallel
Strand 6
A
115 116anti-parallel
Strand 7
A
122 123anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
A
94 96anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
167 168parallel
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