Analysis of interatomic Contacts of Structural Units in PDB entry:
7OTS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7OTS entry

There are 2 chains in PDB entry 7OTS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 45LEU 336
B
 SER 41ASN 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7OTS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
83 86Right-handed 310
Helix 2
AA2
A
87 92Right-handed alpha
Helix 3
AA3
A
120 136Right-handed alpha
Helix 4
AA4
A
137 140Right-handed 310
Helix 5
AA5
A
148 161Right-handed alpha
Helix 6
AA6
A
182 193Right-handed alpha
Helix 7
AA7
A
196 200Right-handed 310
Helix 8
AA8
A
206 218Right-handed alpha
Helix 9
AA9
A
225 235Right-handed alpha
Helix 10
AB1
A
236 238Right-handed 310
Helix 11
AB2
A
239 251Right-handed alpha
Helix 12
AB3
A
257 263Right-handed alpha
Helix 13
AB4
A
264 266Right-handed 310
Helix 14
AB5
A
284 293Right-handed alpha
Helix 15
AB6
A
307 312Right-handed alpha
Helix 16
AB7
A
312 335Right-handed alpha
Helix 17
AB8
B
42 46Right-handed alpha
Helix 18
AB9
B
83 86Right-handed 310
Helix 19
AC1
B
87 92Right-handed alpha
Helix 20
AC2
B
120 136Right-handed alpha
Helix 21
AC3
B
137 140Right-handed 310
Helix 22
AC4
B
148 161Right-handed alpha
Helix 23
AC5
B
182 192Right-handed alpha
Helix 24
AC6
B
206 218Right-handed alpha
Helix 25
AC7
B
225 237Right-handed alpha
Helix 26
AC8
B
239 252Right-handed alpha
Helix 27
AC9
B
252 257Right-handed alpha
Helix 28
AD1
B
257 263Right-handed alpha
Helix 29
AD2
B
264 266Right-handed 310
Helix 30
AD3
B
283 293Right-handed alpha
Helix 31
AD4
B
307 312Right-handed alpha
Helix 32
AD5
B
312 329Right-handed alpha
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There are 2 sheets in PDB entry 7OTS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 55first strand
Strand 2
A
58 65anti-parallel
Strand 3
A
100 103anti-parallel
Strand 4
A
74 77parallel
Strand 5
A
142 147parallel
Strand 6
A
165 171parallel
Strand 7
A
270 275parallel
Strand 8
A
296 301parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 55first strand
Strand 2
B
58 65anti-parallel
Strand 3
B
100 103anti-parallel
Strand 4
B
74 77parallel
Strand 5
B
142 147parallel
Strand 6
B
165 171parallel
Strand 7
B
270 275parallel
Strand 8
B
296 301parallel
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